Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
KRT6AP02538 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
KRT6AP02538 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT6AP02538 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT6AP02538 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
KRT6AP02538 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 FBXW4P1-201ENST00000426721 2239 ntBASIC20.96■□□□□ 0.95
KRT6AP02538 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
KRT6AP02538 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.96■□□□□ 0.95
KRT6AP02538 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 AL356441.2-201ENST00000443009 864 ntBASIC20.96■□□□□ 0.95
KRT6AP02538 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
KRT6AP02538 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT6AP02538 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT6AP02538 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
KRT6AP02538 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT6AP02538 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT6AP02538 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT6AP02538 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT6AP02538 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT6AP02538 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.95■□□□□ 0.94
KRT6AP02538 AL512631.2-201ENST00000604634 923 ntBASIC20.95■□□□□ 0.94
KRT6AP02538 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KRT6AP02538 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT6AP02538 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT6AP02538 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
KRT6AP02538 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
KRT6AP02538 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT6AP02538 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT6AP02538 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT6AP02538 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
KRT6AP02538 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT6AP02538 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
KRT6AP02538 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT6AP02538 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT6AP02538 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT6AP02538 AC068587.7-201ENST00000641602 218 ntBASIC20.94■□□□□ 0.94
KRT6AP02538 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT6AP02538 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6AP02538 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT6AP02538 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT6AP02538 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6AP02538 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6AP02538 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6AP02538 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT6AP02538 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6AP02538 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
KRT6AP02538 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6AP02538 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT6AP02538 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6AP02538 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT6AP02538 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6AP02538 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6AP02538 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT6AP02538 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6AP02538 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT6AP02538 AC079089.2-201ENST00000531211 1277 ntBASIC20.92■□□□□ 0.94
KRT6AP02538 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT6AP02538 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT6AP02538 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT6AP02538 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6AP02538 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
KRT6AP02538 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6AP02538 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6AP02538 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6AP02538 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6AP02538 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT6AP02538 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KRT6AP02538 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT6AP02538 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT6AP02538 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT6AP02538 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT6AP02538 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT6AP02538 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT6AP02538 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT6AP02538 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT6AP02538 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT6AP02538 OR2I1P-207ENST00000453522 948 ntBASIC20.91■□□□□ 0.94
KRT6AP02538 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KRT6AP02538 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.91■□□□□ 0.94
KRT6AP02538 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms