Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RASA4CP-201ENST00000424092 1398 ntBASIC20.26■□□□□ 0.83
SNX4O95219 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.26■□□□□ 0.83
SNX4O95219 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SNX4O95219 ANOS2P-203ENST00000472227 1816 ntBASIC20.26■□□□□ 0.83
SNX4O95219 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.26■□□□□ 0.83
SNX4O95219 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.26■□□□□ 0.83
SNX4O95219 AC092068.2-201ENST00000590491 1708 ntBASIC20.26■□□□□ 0.83
SNX4O95219 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNX4O95219 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX4O95219 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.26■□□□□ 0.83
SNX4O95219 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX4O95219 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SNX4O95219 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX4O95219 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.25■□□□□ 0.83
SNX4O95219 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX4O95219 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX4O95219 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.25■□□□□ 0.83
SNX4O95219 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.25■□□□□ 0.83
SNX4O95219 AC008764.7-201ENST00000593779 1081 ntBASIC20.25■□□□□ 0.83
SNX4O95219 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX4O95219 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX4O95219 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX4O95219 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX4O95219 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.25■□□□□ 0.83
SNX4O95219 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.25■□□□□ 0.83
SNX4O95219 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SNX4O95219 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX4O95219 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX4O95219 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX4O95219 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SNX4O95219 AL121603.2-201ENST00000557373 2117 ntBASIC20.24■□□□□ 0.83
SNX4O95219 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNX4O95219 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SNX4O95219 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.24■□□□□ 0.83
SNX4O95219 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX4O95219 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.24■□□□□ 0.83
SNX4O95219 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX4O95219 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX4O95219 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNX4O95219 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.24■□□□□ 0.83
SNX4O95219 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX4O95219 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNX4O95219 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNX4O95219 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNX4O95219 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX4O95219 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.24■□□□□ 0.83
SNX4O95219 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX4O95219 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX4O95219 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SNX4O95219 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX4O95219 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNX4O95219 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX4O95219 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX4O95219 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SNX4O95219 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX4O95219 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX4O95219 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX4O95219 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.23■□□□□ 0.83
SNX4O95219 OR2I1P-207ENST00000453522 948 ntBASIC20.23■□□□□ 0.83
SNX4O95219 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNX4O95219 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX4O95219 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SNX4O95219 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.23■□□□□ 0.83
SNX4O95219 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SNX4O95219 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SNX4O95219 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX4O95219 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX4O95219 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX4O95219 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SNX4O95219 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX4O95219 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.22■□□□□ 0.83
SNX4O95219 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX4O95219 AC099791.1-201ENST00000416440 715 ntBASIC20.22■□□□□ 0.83
SNX4O95219 CA15P2-201ENST00000611168 834 ntBASIC20.22■□□□□ 0.83
SNX4O95219 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.22■□□□□ 0.83
SNX4O95219 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SNX4O95219 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.21■□□□□ 0.83
SNX4O95219 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SNX4O95219 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 AL137060.1-201ENST00000618151 2648 ntBASIC20.21■□□□□ 0.83
SNX4O95219 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.21■□□□□ 0.83
SNX4O95219 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.21■□□□□ 0.83
SNX4O95219 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SNX4O95219 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
SNX4O95219 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.21■□□□□ 0.83
SNX4O95219 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX4O95219 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SNX4O95219 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNX4O95219 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX4O95219 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX4O95219 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms