Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PFDN1O60925 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PFDN1O60925 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN1O60925 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN1O60925 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.46■□□□□ 0.71
PFDN1O60925 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PFDN1O60925 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 AC079630.1-202ENST00000618127 1840 ntBASIC19.45■□□□□ 0.7
PFDN1O60925 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 AFG3L1P-217ENST00000557444 2447 ntBASIC19.45■□□□□ 0.7
PFDN1O60925 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PFDN1O60925 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN1O60925 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PFDN1O60925 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN1O60925 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PFDN1O60925 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN1O60925 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
PFDN1O60925 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN1O60925 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
PFDN1O60925 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PFDN1O60925 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.43■□□□□ 0.7
PFDN1O60925 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN1O60925 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
PFDN1O60925 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN1O60925 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN1O60925 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN1O60925 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.42■□□□□ 0.7
PFDN1O60925 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.42■□□□□ 0.7
PFDN1O60925 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN1O60925 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN1O60925 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN1O60925 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN1O60925 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN1O60925 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.42■□□□□ 0.7
PFDN1O60925 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PFDN1O60925 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PFDN1O60925 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN1O60925 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN1O60925 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN1O60925 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
PFDN1O60925 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.41■□□□□ 0.7
PFDN1O60925 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN1O60925 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN1O60925 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.41■□□□□ 0.7
PFDN1O60925 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN1O60925 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN1O60925 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN1O60925 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.41■□□□□ 0.7
PFDN1O60925 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN1O60925 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN1O60925 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PFDN1O60925 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PFDN1O60925 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PFDN1O60925 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PFDN1O60925 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PFDN1O60925 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.4■□□□□ 0.7
PFDN1O60925 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.4■□□□□ 0.7
PFDN1O60925 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PFDN1O60925 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PFDN1O60925 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PFDN1O60925 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PFDN1O60925 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
PFDN1O60925 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PFDN1O60925 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms