Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNX3O60493 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNX3O60493 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
SNX3O60493 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNX3O60493 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
SNX3O60493 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 AC004448.1-201ENST00000458332 883 ntBASIC21.39■■□□□ 1.01
SNX3O60493 CA15P2-201ENST00000611168 834 ntBASIC21.39■■□□□ 1.01
SNX3O60493 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.39■■□□□ 1.01
SNX3O60493 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNX3O60493 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SNX3O60493 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNX3O60493 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNX3O60493 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
SNX3O60493 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SNX3O60493 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.38■■□□□ 1.01
SNX3O60493 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNX3O60493 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNX3O60493 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNX3O60493 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNX3O60493 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.37■■□□□ 1.01
SNX3O60493 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNX3O60493 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNX3O60493 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNX3O60493 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNX3O60493 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.37■■□□□ 1.01
SNX3O60493 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNX3O60493 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.37■■□□□ 1.01
SNX3O60493 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.37■■□□□ 1.01
SNX3O60493 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.36■■□□□ 1.01
SNX3O60493 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.36■■□□□ 1.01
SNX3O60493 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SNX3O60493 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNX3O60493 LINC01529-204ENST00000636474 1715 ntBASIC21.36■■□□□ 1.01
SNX3O60493 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNX3O60493 ABHD17AP4-201ENST00000411545 909 ntBASIC21.36■■□□□ 1.01
SNX3O60493 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SNX3O60493 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNX3O60493 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.36■■□□□ 1.01
SNX3O60493 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNX3O60493 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SNX3O60493 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNX3O60493 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.36■■□□□ 1.01
SNX3O60493 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
SNX3O60493 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.35■■□□□ 1.01
SNX3O60493 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX3O60493 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX3O60493 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
SNX3O60493 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX3O60493 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SNX3O60493 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SNX3O60493 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX3O60493 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX3O60493 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.34■■□□□ 1.01
SNX3O60493 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX3O60493 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX3O60493 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.34■■□□□ 1.01
SNX3O60493 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SNX3O60493 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
SNX3O60493 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX3O60493 AL391422.3-201ENST00000603791 2761 ntBASIC21.33■■□□□ 1.01
SNX3O60493 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX3O60493 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SNX3O60493 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX3O60493 AF131216.4-201ENST00000638924 1588 ntBASIC21.33■■□□□ 1.01
SNX3O60493 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SNX3O60493 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX3O60493 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.33■■□□□ 1.01
SNX3O60493 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX3O60493 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.33■■□□□ 1.01
SNX3O60493 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX3O60493 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SNX3O60493 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SNX3O60493 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
SNX3O60493 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.33■■□□□ 1
SNX3O60493 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNX3O60493 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNX3O60493 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNX3O60493 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.32■■□□□ 1
SNX3O60493 MIR6765-201ENST00000614092 87 ntBASIC21.32■■□□□ 1
SNX3O60493 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms