Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.5■□□□□ 0.55
SSX5O60225 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSX5O60225 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX5O60225 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.5■□□□□ 0.55
SSX5O60225 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SSX5O60225 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX5O60225 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX5O60225 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX5O60225 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX5O60225 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSX5O60225 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSX5O60225 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.49■□□□□ 0.55
SSX5O60225 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX5O60225 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.49■□□□□ 0.55
SSX5O60225 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.49■□□□□ 0.55
SSX5O60225 AC074183.2-201ENST00000623112 922 ntBASIC18.49■□□□□ 0.55
SSX5O60225 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.49■□□□□ 0.55
SSX5O60225 FP325331.1-202ENST00000623531 1380 ntBASIC18.49■□□□□ 0.55
SSX5O60225 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX5O60225 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX5O60225 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX5O60225 AF106564.1-201ENST00000607058 2553 ntBASIC18.49■□□□□ 0.55
SSX5O60225 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
SSX5O60225 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX5O60225 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX5O60225 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSX5O60225 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX5O60225 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSX5O60225 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.48■□□□□ 0.55
SSX5O60225 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.48■□□□□ 0.55
SSX5O60225 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 AC010980.1-201ENST00000587192 1142 ntBASIC18.48■□□□□ 0.55
SSX5O60225 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.48■□□□□ 0.55
SSX5O60225 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX5O60225 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SSX5O60225 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX5O60225 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SSX5O60225 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX5O60225 AL391422.3-201ENST00000603791 2761 ntBASIC18.47■□□□□ 0.55
SSX5O60225 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.47■□□□□ 0.55
SSX5O60225 NTF6A-201ENST00000591175 560 ntBASIC18.47■□□□□ 0.55
SSX5O60225 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.47■□□□□ 0.55
SSX5O60225 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.47■□□□□ 0.55
SSX5O60225 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX5O60225 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX5O60225 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.47■□□□□ 0.55
SSX5O60225 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SSX5O60225 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SSX5O60225 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX5O60225 AC244015.2-201ENST00000616358 1861 ntBASIC18.46■□□□□ 0.55
SSX5O60225 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.46■□□□□ 0.55
SSX5O60225 AC004987.1-201ENST00000428627 508 ntBASIC18.46■□□□□ 0.55
SSX5O60225 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SSX5O60225 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.46■□□□□ 0.55
SSX5O60225 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.46■□□□□ 0.55
SSX5O60225 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX5O60225 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX5O60225 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SSX5O60225 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 AC092667.1-201ENST00000434301 2586 ntBASIC18.45■□□□□ 0.54
SSX5O60225 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.45■□□□□ 0.54
SSX5O60225 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SSX5O60225 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 ATP5G2P3-201ENST00000429083 425 ntBASIC18.45■□□□□ 0.54
SSX5O60225 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.45■□□□□ 0.54
SSX5O60225 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.45■□□□□ 0.54
SSX5O60225 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX5O60225 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX5O60225 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SSX5O60225 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX5O60225 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.44■□□□□ 0.54
SSX5O60225 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX5O60225 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX5O60225 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX5O60225 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.44■□□□□ 0.54
SSX5O60225 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX5O60225 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SSX5O60225 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX5O60225 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.44■□□□□ 0.54
SSX5O60225 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.44■□□□□ 0.54
SSX5O60225 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.44■□□□□ 0.54
SSX5O60225 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms