Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF9O43307 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF9O43307 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.94■□□□□ 0.78
ARHGEF9O43307 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ARHGEF9O43307 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.94■□□□□ 0.78
ARHGEF9O43307 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF9O43307 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF9O43307 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ARHGEF9O43307 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF9O43307 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.94■□□□□ 0.78
ARHGEF9O43307 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF9O43307 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ARHGEF9O43307 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ARHGEF9O43307 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF9O43307 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.93■□□□□ 0.78
ARHGEF9O43307 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF9O43307 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF9O43307 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.93■□□□□ 0.78
ARHGEF9O43307 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF9O43307 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ARHGEF9O43307 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF9O43307 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF9O43307 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF9O43307 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.92■□□□□ 0.78
ARHGEF9O43307 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.92■□□□□ 0.78
ARHGEF9O43307 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.92■□□□□ 0.78
ARHGEF9O43307 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF9O43307 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF9O43307 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ARHGEF9O43307 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ARHGEF9O43307 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF9O43307 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF9O43307 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF9O43307 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF9O43307 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.91■□□□□ 0.78
ARHGEF9O43307 ZNRF2P3-201ENST00000424200 374 ntBASIC19.91■□□□□ 0.78
ARHGEF9O43307 MIR5787-201ENST00000611784 55 ntBASIC19.91■□□□□ 0.78
ARHGEF9O43307 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ARHGEF9O43307 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
ARHGEF9O43307 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.9■□□□□ 0.78
ARHGEF9O43307 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ARHGEF9O43307 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 AC007375.3-201ENST00000600936 2314 ntBASIC19.9■□□□□ 0.78
ARHGEF9O43307 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.9■□□□□ 0.78
ARHGEF9O43307 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ARHGEF9O43307 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 AC104564.3-201ENST00000582367 638 ntBASIC19.9■□□□□ 0.78
ARHGEF9O43307 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ARHGEF9O43307 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ARHGEF9O43307 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.9■□□□□ 0.78
ARHGEF9O43307 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARHGEF9O43307 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF9O43307 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF9O43307 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.89■□□□□ 0.77
ARHGEF9O43307 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF9O43307 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ARHGEF9O43307 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF9O43307 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF9O43307 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ARHGEF9O43307 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.89■□□□□ 0.77
ARHGEF9O43307 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.89■□□□□ 0.77
ARHGEF9O43307 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.89■□□□□ 0.77
ARHGEF9O43307 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.89■□□□□ 0.77
ARHGEF9O43307 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.89■□□□□ 0.77
ARHGEF9O43307 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARHGEF9O43307 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF9O43307 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ARHGEF9O43307 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF9O43307 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ARHGEF9O43307 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF9O43307 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.88■□□□□ 0.77
ARHGEF9O43307 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF9O43307 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.88■□□□□ 0.77
ARHGEF9O43307 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF9O43307 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.88■□□□□ 0.77
ARHGEF9O43307 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.88■□□□□ 0.77
ARHGEF9O43307 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARHGEF9O43307 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ARHGEF9O43307 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.87■□□□□ 0.77
ARHGEF9O43307 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ARHGEF9O43307 GUSBP5-202ENST00000510805 1989 ntBASIC19.87■□□□□ 0.77
ARHGEF9O43307 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ARHGEF9O43307 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ARHGEF9O43307 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ARHGEF9O43307 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.87■□□□□ 0.77
ARHGEF9O43307 LINC00526-201ENST00000581067 1875 ntBASIC19.87■□□□□ 0.77
ARHGEF9O43307 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ARHGEF9O43307 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms