Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MID1O15344 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.79■■□□□ 1.08
MID1O15344 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
MID1O15344 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
MID1O15344 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.78■■□□□ 1.08
MID1O15344 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
MID1O15344 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MID1O15344 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.78■■□□□ 1.08
MID1O15344 AC006015.1-201ENST00000429970 570 ntBASIC21.78■■□□□ 1.08
MID1O15344 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.78■■□□□ 1.08
MID1O15344 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.78■■□□□ 1.08
MID1O15344 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MID1O15344 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MID1O15344 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MID1O15344 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.78■■□□□ 1.08
MID1O15344 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MID1O15344 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MID1O15344 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
MID1O15344 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MID1O15344 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MID1O15344 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
MID1O15344 AC005224.4-201ENST00000583262 1652 ntBASIC21.77■■□□□ 1.08
MID1O15344 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
MID1O15344 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.77■■□□□ 1.08
MID1O15344 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.77■■□□□ 1.08
MID1O15344 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
MID1O15344 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.77■■□□□ 1.08
MID1O15344 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MID1O15344 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.77■■□□□ 1.08
MID1O15344 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.76■■□□□ 1.07
MID1O15344 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MID1O15344 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MID1O15344 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MID1O15344 AC079089.2-201ENST00000531211 1277 ntBASIC21.76■■□□□ 1.07
MID1O15344 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.76■■□□□ 1.07
MID1O15344 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MID1O15344 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.76■■□□□ 1.07
MID1O15344 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MID1O15344 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
MID1O15344 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MID1O15344 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MID1O15344 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MID1O15344 AC009237.3-201ENST00000393279 1427 ntBASIC21.75■■□□□ 1.07
MID1O15344 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.75■■□□□ 1.07
MID1O15344 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.75■■□□□ 1.07
MID1O15344 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MID1O15344 KRT19P1-201ENST00000405746 1186 ntBASIC21.75■■□□□ 1.07
MID1O15344 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MID1O15344 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.75■■□□□ 1.07
MID1O15344 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.75■■□□□ 1.07
MID1O15344 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.75■■□□□ 1.07
MID1O15344 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.75■■□□□ 1.07
MID1O15344 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.75■■□□□ 1.07
MID1O15344 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MID1O15344 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MID1O15344 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MID1O15344 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MID1O15344 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MID1O15344 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.74■■□□□ 1.07
MID1O15344 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.74■■□□□ 1.07
MID1O15344 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.74■■□□□ 1.07
MID1O15344 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MID1O15344 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.74■■□□□ 1.07
MID1O15344 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.74■■□□□ 1.07
MID1O15344 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MID1O15344 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MID1O15344 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MID1O15344 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MID1O15344 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MID1O15344 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.73■■□□□ 1.07
MID1O15344 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MID1O15344 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
MID1O15344 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
MID1O15344 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.73■■□□□ 1.07
MID1O15344 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.73■■□□□ 1.07
MID1O15344 AC080038.1-201ENST00000611274 1154 ntBASIC21.73■■□□□ 1.07
MID1O15344 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.73■■□□□ 1.07
MID1O15344 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MID1O15344 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.72■■□□□ 1.07
MID1O15344 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MID1O15344 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MID1O15344 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MID1O15344 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MID1O15344 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
MID1O15344 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MID1O15344 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MID1O15344 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.72■■□□□ 1.07
MID1O15344 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MID1O15344 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MID1O15344 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.71■■□□□ 1.07
MID1O15344 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.71■■□□□ 1.07
MID1O15344 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MID1O15344 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MID1O15344 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MID1O15344 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MID1O15344 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.71■■□□□ 1.07
MID1O15344 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MID1O15344 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MID1O15344 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.71■■□□□ 1.07
MID1O15344 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms