Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RTL8CO15255 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RTL8CO15255 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RTL8CO15255 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RTL8CO15255 OXCT2P1-201ENST00000447263 1535 ntBASIC14.51□□□□□ -0.09
RTL8CO15255 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RTL8CO15255 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RTL8CO15255 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 KRT87P-202ENST00000534226 1464 ntBASIC14.5□□□□□ -0.09
RTL8CO15255 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC14.5□□□□□ -0.09
RTL8CO15255 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RTL8CO15255 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.5□□□□□ -0.09
RTL8CO15255 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.5□□□□□ -0.09
RTL8CO15255 AC069152.1-201ENST00000438030 544 ntBASIC14.5□□□□□ -0.09
RTL8CO15255 FAM201B-201ENST00000458407 597 ntBASIC14.5□□□□□ -0.09
RTL8CO15255 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RTL8CO15255 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.5□□□□□ -0.09
RTL8CO15255 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RTL8CO15255 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.5□□□□□ -0.09
RTL8CO15255 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.5□□□□□ -0.09
RTL8CO15255 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.5□□□□□ -0.09
RTL8CO15255 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.5□□□□□ -0.09
RTL8CO15255 LINC00543-201ENST00000567234 1845 ntBASIC14.5□□□□□ -0.09
RTL8CO15255 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RTL8CO15255 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.5□□□□□ -0.09
RTL8CO15255 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.49□□□□□ -0.09
RTL8CO15255 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RTL8CO15255 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RTL8CO15255 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RTL8CO15255 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RTL8CO15255 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RTL8CO15255 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RTL8CO15255 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RTL8CO15255 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.49□□□□□ -0.09
RTL8CO15255 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.49□□□□□ -0.09
RTL8CO15255 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RTL8CO15255 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RTL8CO15255 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RTL8CO15255 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RTL8CO15255 AC079630.1-202ENST00000618127 1840 ntBASIC14.48□□□□□ -0.09
RTL8CO15255 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.48□□□□□ -0.09
RTL8CO15255 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RTL8CO15255 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.48□□□□□ -0.09
RTL8CO15255 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RTL8CO15255 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RTL8CO15255 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RTL8CO15255 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RTL8CO15255 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC14.48□□□□□ -0.09
RTL8CO15255 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RTL8CO15255 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RTL8CO15255 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RTL8CO15255 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RTL8CO15255 AC005224.4-201ENST00000583262 1652 ntBASIC14.48□□□□□ -0.09
RTL8CO15255 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.48□□□□□ -0.09
RTL8CO15255 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC14.47□□□□□ -0.09
RTL8CO15255 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.47□□□□□ -0.09
RTL8CO15255 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.47□□□□□ -0.09
RTL8CO15255 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RTL8CO15255 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
RTL8CO15255 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RTL8CO15255 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RTL8CO15255 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.47□□□□□ -0.09
RTL8CO15255 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.47□□□□□ -0.09
RTL8CO15255 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RTL8CO15255 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.47□□□□□ -0.09
RTL8CO15255 AC093827.2-201ENST00000512654 315 ntBASIC14.47□□□□□ -0.09
RTL8CO15255 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.47□□□□□ -0.09
RTL8CO15255 MYCNOS-205ENST00000641950 531 ntBASIC14.47□□□□□ -0.09
RTL8CO15255 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RTL8CO15255 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RTL8CO15255 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTL8CO15255 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RTL8CO15255 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RTL8CO15255 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RTL8CO15255 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTL8CO15255 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTL8CO15255 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RTL8CO15255 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.46□□□□□ -0.09
RTL8CO15255 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTL8CO15255 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.46□□□□□ -0.09
RTL8CO15255 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RTL8CO15255 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.46□□□□□ -0.09
RTL8CO15255 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.46□□□□□ -0.09
RTL8CO15255 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
RTL8CO15255 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.46□□□□□ -0.09
RTL8CO15255 AC133041.1-202ENST00000642053 222 ntBASIC14.46□□□□□ -0.09
RTL8CO15255 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC14.46□□□□□ -0.09
RTL8CO15255 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RTL8CO15255 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTL8CO15255 AL139125.2-201ENST00000623134 1869 ntBASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms