Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.08■□□□□ 0.97
UBFD1O14562 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
UBFD1O14562 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.08■□□□□ 0.97
UBFD1O14562 AC005229.4-201ENST00000610085 2198 ntBASIC21.08■□□□□ 0.97
UBFD1O14562 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.08■□□□□ 0.97
UBFD1O14562 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.08■□□□□ 0.97
UBFD1O14562 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
UBFD1O14562 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBFD1O14562 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBFD1O14562 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
UBFD1O14562 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.07■□□□□ 0.96
UBFD1O14562 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
UBFD1O14562 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.07■□□□□ 0.96
UBFD1O14562 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 pRNA.6-201ENST00000610482 90 ntBASIC21.07■□□□□ 0.96
UBFD1O14562 pRNA.5-201ENST00000612139 90 ntBASIC21.07■□□□□ 0.96
UBFD1O14562 pRNA.11-201ENST00000618423 90 ntBASIC21.07■□□□□ 0.96
UBFD1O14562 pRNA.13-201ENST00000619112 90 ntBASIC21.07■□□□□ 0.96
UBFD1O14562 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
UBFD1O14562 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.07■□□□□ 0.96
UBFD1O14562 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBFD1O14562 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
UBFD1O14562 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBFD1O14562 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBFD1O14562 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBFD1O14562 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.06■□□□□ 0.96
UBFD1O14562 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.06■□□□□ 0.96
UBFD1O14562 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
UBFD1O14562 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.06■□□□□ 0.96
UBFD1O14562 KRT16P3-201ENST00000439127 1283 ntBASIC21.06■□□□□ 0.96
UBFD1O14562 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.06■□□□□ 0.96
UBFD1O14562 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.06■□□□□ 0.96
UBFD1O14562 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBFD1O14562 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBFD1O14562 AC026471.6-201ENST00000622954 1905 ntBASIC21.06■□□□□ 0.96
UBFD1O14562 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBFD1O14562 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.05■□□□□ 0.96
UBFD1O14562 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.05■□□□□ 0.96
UBFD1O14562 AC099791.2-201ENST00000605725 427 ntBASIC21.05■□□□□ 0.96
UBFD1O14562 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.05■□□□□ 0.96
UBFD1O14562 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.05■□□□□ 0.96
UBFD1O14562 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.05■□□□□ 0.96
UBFD1O14562 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBFD1O14562 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.04■□□□□ 0.96
UBFD1O14562 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.04■□□□□ 0.96
UBFD1O14562 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBFD1O14562 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBFD1O14562 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.04■□□□□ 0.96
UBFD1O14562 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.04■□□□□ 0.96
UBFD1O14562 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBFD1O14562 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBFD1O14562 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
UBFD1O14562 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
UBFD1O14562 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBFD1O14562 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBFD1O14562 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBFD1O14562 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBFD1O14562 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.03■□□□□ 0.96
UBFD1O14562 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.03■□□□□ 0.96
UBFD1O14562 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.03■□□□□ 0.96
UBFD1O14562 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
UBFD1O14562 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.03■□□□□ 0.96
UBFD1O14562 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBFD1O14562 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBFD1O14562 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBFD1O14562 AL024507.2-201ENST00000606070 2574 ntBASIC21.03■□□□□ 0.96
UBFD1O14562 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBFD1O14562 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBFD1O14562 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBFD1O14562 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.02■□□□□ 0.96
UBFD1O14562 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBFD1O14562 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
UBFD1O14562 AC079089.2-201ENST00000531211 1277 ntBASIC21.02■□□□□ 0.96
UBFD1O14562 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.02■□□□□ 0.96
UBFD1O14562 AL035685.1-201ENST00000636663 812 ntBASIC21.02■□□□□ 0.96
UBFD1O14562 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBFD1O14562 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
UBFD1O14562 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBFD1O14562 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.01■□□□□ 0.95
UBFD1O14562 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms