Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TLR4O00206 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR4O00206 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TLR4O00206 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.52■■□□□ 1.04
TLR4O00206 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.52■■□□□ 1.04
TLR4O00206 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.52■■□□□ 1.04
TLR4O00206 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
TLR4O00206 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TLR4O00206 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR4O00206 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR4O00206 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TLR4O00206 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TLR4O00206 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TLR4O00206 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TLR4O00206 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TLR4O00206 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TLR4O00206 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TLR4O00206 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TLR4O00206 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.51■■□□□ 1.03
TLR4O00206 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.51■■□□□ 1.03
TLR4O00206 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
TLR4O00206 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TLR4O00206 HLA-L-209ENST00000420110 1011 ntBASIC21.5■■□□□ 1.03
TLR4O00206 CDCA4P2-201ENST00000441182 718 ntBASIC21.5■■□□□ 1.03
TLR4O00206 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.5■■□□□ 1.03
TLR4O00206 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.5■■□□□ 1.03
TLR4O00206 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.5■■□□□ 1.03
TLR4O00206 AC073111.5-205ENST00000641717 521 ntBASIC21.5■■□□□ 1.03
TLR4O00206 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TLR4O00206 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TLR4O00206 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TLR4O00206 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TLR4O00206 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.5■■□□□ 1.03
TLR4O00206 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TLR4O00206 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.49■■□□□ 1.03
TLR4O00206 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.49■■□□□ 1.03
TLR4O00206 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TLR4O00206 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
TLR4O00206 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TLR4O00206 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.49■■□□□ 1.03
TLR4O00206 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.49■■□□□ 1.03
TLR4O00206 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TLR4O00206 RAP2CP1-201ENST00000605103 478 ntBASIC21.49■■□□□ 1.03
TLR4O00206 BID-214ENST00000617586 542 ntTSL 5 BASIC21.49■■□□□ 1.03
TLR4O00206 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TLR4O00206 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TLR4O00206 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TLR4O00206 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TLR4O00206 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TLR4O00206 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TLR4O00206 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TLR4O00206 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TLR4O00206 AC068473.5-201ENST00000616428 2072 ntBASIC21.48■■□□□ 1.03
TLR4O00206 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.48■■□□□ 1.03
TLR4O00206 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TLR4O00206 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TLR4O00206 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TLR4O00206 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TLR4O00206 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TLR4O00206 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.48■■□□□ 1.03
TLR4O00206 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.48■■□□□ 1.03
TLR4O00206 AC079140.4-201ENST00000507448 529 ntBASIC21.48■■□□□ 1.03
TLR4O00206 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TLR4O00206 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TLR4O00206 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.48■■□□□ 1.03
TLR4O00206 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.48■■□□□ 1.03
TLR4O00206 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
TLR4O00206 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TLR4O00206 DUSP8P3-201ENST00000399571 1760 ntBASIC21.48■■□□□ 1.03
TLR4O00206 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
TLR4O00206 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TLR4O00206 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TLR4O00206 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TLR4O00206 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TLR4O00206 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TLR4O00206 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TLR4O00206 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.47■■□□□ 1.03
TLR4O00206 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.47■■□□□ 1.03
TLR4O00206 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
TLR4O00206 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.47■■□□□ 1.03
TLR4O00206 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TLR4O00206 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
TLR4O00206 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TLR4O00206 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.47■■□□□ 1.03
TLR4O00206 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.47■■□□□ 1.03
TLR4O00206 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TLR4O00206 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TLR4O00206 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TLR4O00206 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TLR4O00206 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TLR4O00206 AC026185.1-201ENST00000445748 174 ntBASIC21.46■■□□□ 1.03
TLR4O00206 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.46■■□□□ 1.03
TLR4O00206 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TLR4O00206 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.46■■□□□ 1.03
TLR4O00206 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
TLR4O00206 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR4O00206 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR4O00206 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR4O00206 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TLR4O00206 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms