Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 ESRRAP2-201ENST00000418437 1549 ntBASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 AC005224.4-201ENST00000583262 1652 ntBASIC22.11■■□□□ 1.13
TBC1D3BA6NDS4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3BA6NDS4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3BA6NDS4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
TBC1D3BA6NDS4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.1■■□□□ 1.13
TBC1D3BA6NDS4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.1■■□□□ 1.13
TBC1D3BA6NDS4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3BA6NDS4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3BA6NDS4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D3BA6NDS4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.09■■□□□ 1.13
TBC1D3BA6NDS4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3BA6NDS4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
TBC1D3BA6NDS4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3BA6NDS4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3BA6NDS4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.09■■□□□ 1.13
TBC1D3BA6NDS4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3BA6NDS4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D3BA6NDS4 LINC01960-201ENST00000563759 1884 ntBASIC22.09■■□□□ 1.13
TBC1D3BA6NDS4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 HLA-L-209ENST00000420110 1011 ntBASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 KRT18P11-201ENST00000435214 1283 ntBASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.08■■□□□ 1.13
TBC1D3BA6NDS4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 AC026185.1-201ENST00000445748 174 ntBASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 RAP2CP1-201ENST00000605103 478 ntBASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.07■■□□□ 1.12
TBC1D3BA6NDS4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D3BA6NDS4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 AC079089.2-201ENST00000531211 1277 ntBASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 AC011767.1-201ENST00000617410 1153 ntBASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.05■■□□□ 1.12
TBC1D3BA6NDS4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 KRT87P-202ENST00000534226 1464 ntBASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D3BA6NDS4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TBC1D3BA6NDS4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TBC1D3BA6NDS4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TBC1D3BA6NDS4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.03■■□□□ 1.12
TBC1D3BA6NDS4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.03■■□□□ 1.12
TBC1D3BA6NDS4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TBC1D3BA6NDS4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.03■■□□□ 1.12
TBC1D3BA6NDS4 AC104187.1-201ENST00000607510 612 ntBASIC22.03■■□□□ 1.12
TBC1D3BA6NDS4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TBC1D3BA6NDS4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.03■■□□□ 1.12
TBC1D3BA6NDS4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms