Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC29.77■■■□□ 2.36
SBNO1A3KN83 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SBNO1A3KN83 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC29.77■■■□□ 2.36
SBNO1A3KN83 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.36
SBNO1A3KN83 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SBNO1A3KN83 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC29.76■■■□□ 2.35
SBNO1A3KN83 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
SBNO1A3KN83 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SBNO1A3KN83 FAM201B-201ENST00000458407 597 ntBASIC29.76■■■□□ 2.35
SBNO1A3KN83 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
SBNO1A3KN83 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SBNO1A3KN83 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SBNO1A3KN83 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
SBNO1A3KN83 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SBNO1A3KN83 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SBNO1A3KN83 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
SBNO1A3KN83 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SBNO1A3KN83 APTR-203ENST00000430801 583 ntTSL 5 BASIC29.75■■■□□ 2.35
SBNO1A3KN83 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SBNO1A3KN83 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
SBNO1A3KN83 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SBNO1A3KN83 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
SBNO1A3KN83 AC093827.2-201ENST00000512654 315 ntBASIC29.74■■■□□ 2.35
SBNO1A3KN83 AF201337.1-201ENST00000520239 748 ntBASIC29.74■■■□□ 2.35
SBNO1A3KN83 AC008687.6-201ENST00000596318 630 ntBASIC29.74■■■□□ 2.35
SBNO1A3KN83 AP001160.3-201ENST00000601484 763 ntBASIC29.74■■■□□ 2.35
SBNO1A3KN83 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SBNO1A3KN83 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SBNO1A3KN83 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SBNO1A3KN83 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC29.73■■■□□ 2.35
SBNO1A3KN83 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SBNO1A3KN83 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
SBNO1A3KN83 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC29.73■■■□□ 2.35
SBNO1A3KN83 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SBNO1A3KN83 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC29.73■■■□□ 2.35
SBNO1A3KN83 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC29.73■■■□□ 2.35
SBNO1A3KN83 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
SBNO1A3KN83 TBCB-214ENST00000629269 413 ntTSL 5 BASIC29.73■■■□□ 2.35
SBNO1A3KN83 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SBNO1A3KN83 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
SBNO1A3KN83 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SBNO1A3KN83 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
SBNO1A3KN83 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SBNO1A3KN83 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SBNO1A3KN83 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SBNO1A3KN83 DET1-205ENST00000558413 583 ntTSL 4 BASIC29.71■■■□□ 2.35
SBNO1A3KN83 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC29.71■■■□□ 2.35
SBNO1A3KN83 MFF-207ENST00000409565 1548 ntTSL 2 BASIC29.71■■■□□ 2.35
SBNO1A3KN83 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
SBNO1A3KN83 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
SBNO1A3KN83 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
SBNO1A3KN83 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
SBNO1A3KN83 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
SBNO1A3KN83 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
SBNO1A3KN83 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC29.7■■■□□ 2.35
SBNO1A3KN83 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.35
SBNO1A3KN83 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
SBNO1A3KN83 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC29.7■■■□□ 2.34
SBNO1A3KN83 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC29.69■■■□□ 2.34
SBNO1A3KN83 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC29.69■■■□□ 2.34
SBNO1A3KN83 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SBNO1A3KN83 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SBNO1A3KN83 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
SBNO1A3KN83 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SBNO1A3KN83 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SBNO1A3KN83 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SBNO1A3KN83 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC29.68■■■□□ 2.34
SBNO1A3KN83 H19-210ENST00000439725 1929 ntTSL 2 BASIC29.68■■■□□ 2.34
SBNO1A3KN83 AL353803.4-201ENST00000565882 1934 ntBASIC29.68■■■□□ 2.34
SBNO1A3KN83 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SBNO1A3KN83 AC105036.2-201ENST00000569468 176 ntBASIC29.68■■■□□ 2.34
SBNO1A3KN83 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC29.68■■■□□ 2.34
SBNO1A3KN83 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC29.68■■■□□ 2.34
SBNO1A3KN83 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
SBNO1A3KN83 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SBNO1A3KN83 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SBNO1A3KN83 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC29.67■■■□□ 2.34
SBNO1A3KN83 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC29.67■■■□□ 2.34
SBNO1A3KN83 POU5F1P3-201ENST00000428824 1078 ntBASIC29.67■■■□□ 2.34
SBNO1A3KN83 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SBNO1A3KN83 ITM2C-210ENST00000620962 501 ntBASIC29.67■■■□□ 2.34
SBNO1A3KN83 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
SBNO1A3KN83 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
SBNO1A3KN83 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
SBNO1A3KN83 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SBNO1A3KN83 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SBNO1A3KN83 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SBNO1A3KN83 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SBNO1A3KN83 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC29.66■■■□□ 2.34
SBNO1A3KN83 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SBNO1A3KN83 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
SBNO1A3KN83 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC29.66■■■□□ 2.34
SBNO1A3KN83 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SBNO1A3KN83 UQCRFS1P1-201ENST00000435169 820 ntBASIC29.65■■■□□ 2.34
SBNO1A3KN83 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SBNO1A3KN83 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SBNO1A3KN83 AC010536.3-201ENST00000620306 533 ntBASIC29.65■■■□□ 2.34
SBNO1A3KN83 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
SBNO1A3KN83 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SBNO1A3KN83 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms