Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 MIR4508-201ENST00000584178 70 ntBASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV27A0A0K0K1C4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 NTF6A-201ENST00000591175 560 ntBASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV27A0A0K0K1C4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 HSD17B1P1-201ENST00000590052 955 ntBASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 AC137630.3-201ENST00000607245 391 ntBASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV27A0A0K0K1C4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 ATP5G2P3-201ENST00000429083 425 ntBASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 AC010980.1-201ENST00000587192 1142 ntBASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 LINC01521-201ENST00000504184 1943 ntBASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV27A0A0K0K1C4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 ABHD17AP5-201ENST00000580133 923 ntBASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms