Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 AC010542.4-201ENST00000563151 1910 ntBASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 AC136428.2-201ENST00000563187 214 ntBASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC12.29□□□□□ -0.44
TRAV22A0A0B4J277 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 AC090340.1-201ENST00000620778 4980 ntBASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAV22A0A0B4J277 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC12.27□□□□□ -0.44
TRAV22A0A0B4J277 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 AC126177.7-201ENST00000547904 679 ntBASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV22A0A0B4J277 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms