Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 BHLHE23-202ENST00000612929 1109 ntBASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 AC009086.3-201ENST00000623486 1008 ntBASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV18A0A075B6X5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 RARRES2P2-201ENST00000394842 485 ntBASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 Z98882.1-201ENST00000622160 2253 ntBASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV18A0A075B6X5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV18A0A075B6X5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV18A0A075B6X5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV18A0A075B6X5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV18A0A075B6X5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV18A0A075B6X5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV18A0A075B6X5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV18A0A075B6X5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAV18A0A075B6X5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV18A0A075B6X5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV18A0A075B6X5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV18A0A075B6X5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV18A0A075B6X5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV18A0A075B6X5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV18A0A075B6X5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV18A0A075B6X5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV18A0A075B6X5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 SNX5-217ENST00000606557 1087 ntBASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 AF106564.1-201ENST00000607058 2553 ntBASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV18A0A075B6X5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRAV18A0A075B6X5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV18A0A075B6X5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAV18A0A075B6X5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV18A0A075B6X5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV18A0A075B6X5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV18A0A075B6X5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV18A0A075B6X5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms