Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 AC131274.2-201ENST00000580697 1507 ntBASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 GABARAPL3-202ENST00000624044 1851 ntBASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-1A0A075B6T8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-1A0A075B6T8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAV9-1A0A075B6T8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV9-1A0A075B6T8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAV9-1A0A075B6T8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV9-1A0A075B6T8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV9-1A0A075B6T8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV9-1A0A075B6T8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV9-1A0A075B6T8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRAV9-1A0A075B6T8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV9-1A0A075B6T8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV9-1A0A075B6T8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV9-1A0A075B6T8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRAV9-1A0A075B6T8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV9-1A0A075B6T8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-1A0A075B6T8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 RP9P-202ENST00000450133 1212 ntBASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms