Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 APTX-203ENST00000379813 1121 ntTSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 MIR181D-201ENST00000384853 137 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 PRKCE-202ENST00000394874 996 ntTSL 3 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 HLA-DRA-202ENST00000395388 1280 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 MIR1226-201ENST00000408658 75 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 HMGB3P4-201ENST00000428776 514 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 RRM2P2-201ENST00000436212 652 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 C10orf71-AS1-201ENST00000437677 753 ntTSL 2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AL663070.1-201ENST00000438210 725 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 C2orf27AP2-201ENST00000438438 555 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AC099681.2-201ENST00000449899 543 ntTSL 4 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AC023162.1-201ENST00000505608 474 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AC067942.2-201ENST00000506227 1268 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 IGHV3-6-201ENST00000518407 347 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 KRT18P7-201ENST00000557241 1219 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 PPY-202ENST00000587006 431 ntTSL 3 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AL627230.7-201ENST00000613971 601 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AL450487.2-201ENST00000615934 407 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AL512324.3-201ENST00000619383 882 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AC025278.3-201ENST00000636139 796 ntBASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 WDSUB1-204ENST00000409124 1600 ntTSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 ALK-205ENST00000618119 4646 ntTSL 5 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 AC026904.1-201ENST00000430626 3549 ntTSL 2 BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 GHRL-201ENST00000287656 1313 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 PALM2-201ENST00000314527 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NPIPA3F8WFD2 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.59
NPIPA3F8WFD2 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC11.33□□□□□ -0.59
NPIPA3F8WFD2 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
NPIPA3F8WFD2 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC11.33□□□□□ -0.59
NPIPA3F8WFD2 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
NPIPA3F8WFD2 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
NPIPA3F8WFD2 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 IP6K3-202ENST00000451316 2012 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 PIMREG-206ENST00000572595 1551 ntTSL 3 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 SLC25A19-210ENST00000580994 1554 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AC005682.1-201ENST00000452069 1467 ntBASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 LIPG-205ENST00000580036 1453 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 RABL2A-207ENST00000409875 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 COX6B2-209ENST00000590900 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 CACNG1-201ENST00000226021 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 GALM-202ENST00000410063 1023 ntTSL 3 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AL355493.1-201ENST00000422707 808 ntBASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 GAPDHP67-201ENST00000422905 788 ntBASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 HLA-DRB9-201ENST00000449413 343 ntBASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 RN7SL846P-201ENST00000467429 292 ntBASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 EEF1GP2-201ENST00000509352 1243 ntBASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AL645949.2-201ENST00000513434 786 ntBASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 IGHVII-65-1-201ENST00000519992 302 ntBASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AC022239.3-201ENST00000528629 544 ntTSL 4 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AC127002.1-201ENST00000619123 455 ntBASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 LINC00969-263ENST00000626007 839 ntTSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 PAAF1-214ENST00000544552 1612 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms