Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC11.79□□□□□ -0.52
SCN2BO60939 SCML4-202ENST00000369021 2056 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 AC019294.1-202ENST00000566174 2071 ntBASIC11.79□□□□□ -0.52
SCN2BO60939 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC11.79□□□□□ -0.52
SCN2BO60939 IFT81-209ENST00000552912 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SCN2BO60939 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SCN2BO60939 IGF1-203ENST00000392904 761 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 RPL17P11-201ENST00000417593 544 ntBASIC11.79□□□□□ -0.52
SCN2BO60939 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC11.79□□□□□ -0.52
SCN2BO60939 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC11.79□□□□□ -0.52
SCN2BO60939 HNRNPA1P10-201ENST00000444945 962 ntBASIC11.79□□□□□ -0.52
SCN2BO60939 NEURL1-AS1-202ENST00000453753 640 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 AC063952.3-201ENST00000467756 308 ntBASIC11.79□□□□□ -0.52
SCN2BO60939 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC11.79□□□□□ -0.52
SCN2BO60939 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC11.79□□□□□ -0.52
SCN2BO60939 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 MIR4539-201ENST00000579784 60 ntBASIC11.79□□□□□ -0.52
SCN2BO60939 APOC1-209ENST00000592885 562 ntTSL 3 BASIC11.79□□□□□ -0.52
SCN2BO60939 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC11.79□□□□□ -0.52
SCN2BO60939 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 AC006986.1-201ENST00000612764 241 ntBASIC11.79□□□□□ -0.52
SCN2BO60939 AC073592.2-201ENST00000623062 780 ntBASIC11.79□□□□□ -0.52
SCN2BO60939 FP671120.4-201ENST00000629969 923 ntBASIC11.79□□□□□ -0.52
SCN2BO60939 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 ADGRE2-205ENST00000594076 2193 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SCN2BO60939 GK-207ENST00000427190 4573 ntTSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 RFC3-201ENST00000380071 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SCN2BO60939 TGM5-201ENST00000220420 2767 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCN2BO60939 TGM5-205ENST00000610827 2756 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SCN2BO60939 ASB9-201ENST00000380483 1612 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 AC090952.2-201ENST00000635800 1620 ntTSL 5 BASIC11.78□□□□□ -0.52
SCN2BO60939 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.78□□□□□ -0.52
SCN2BO60939 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 CYP51A1P3-201ENST00000400072 1428 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC11.78□□□□□ -0.52
SCN2BO60939 KNSTRN-203ENST00000448395 1464 ntTSL 2 BASIC11.78□□□□□ -0.52
SCN2BO60939 S1PR3-201ENST00000358157 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 ADAM1B-201ENST00000454683 2000 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 WDR81-201ENST00000309182 3808 ntTSL 2 BASIC11.78□□□□□ -0.52
SCN2BO60939 HDGF-202ENST00000368206 960 ntTSL 5 BASIC11.78□□□□□ -0.52
SCN2BO60939 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 AL357055.2-201ENST00000412567 434 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 OR51A9P-201ENST00000422578 911 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 HCG27-204ENST00000424675 895 ntTSL 3 BASIC11.78□□□□□ -0.52
SCN2BO60939 AC009305.1-201ENST00000449780 368 ntTSL 2 BASIC11.78□□□□□ -0.52
SCN2BO60939 YBX1P3-201ENST00000468366 909 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC11.78□□□□□ -0.52
SCN2BO60939 RN7SL646P-201ENST00000492969 297 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC11.78□□□□□ -0.52
SCN2BO60939 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC11.78□□□□□ -0.52
SCN2BO60939 LMO3-228ENST00000541846 573 ntAPPRIS P1 TSL 4 BASIC11.78□□□□□ -0.52
SCN2BO60939 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC11.78□□□□□ -0.52
SCN2BO60939 MIR4750-201ENST00000584564 56 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 AC055811.3-201ENST00000584952 686 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC11.78□□□□□ -0.52
SCN2BO60939 AC092327.1-201ENST00000596612 744 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 AC048382.6-201ENST00000621980 1223 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC11.78□□□□□ -0.52
SCN2BO60939 SHROOM2P1-201ENST00000434773 2384 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC11.78□□□□□ -0.52
SCN2BO60939 AC092978.1-202ENST00000637590 1327 ntBASIC11.78□□□□□ -0.52
SCN2BO60939 L3MBTL3-207ENST00000529410 4518 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
SCN2BO60939 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
SCN2BO60939 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC11.78□□□□□ -0.52
SCN2BO60939 DNAI2-206ENST00000582036 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 SCAMP1-207ENST00000621999 4509 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCN2BO60939 JRKL-201ENST00000332349 2855 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
SCN2BO60939 DPYD-201ENST00000306031 1779 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SCN2BO60939 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
SCN2BO60939 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
SCN2BO60939 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SCN2BO60939 AP003559.1-201ENST00000540906 1831 ntTSL 3 BASIC11.77□□□□□ -0.52
SCN2BO60939 UBR4-203ENST00000375225 1533 ntTSL 2 BASIC11.77□□□□□ -0.52
SCN2BO60939 ZNF488-202ENST00000591025 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC11.77□□□□□ -0.53
SCN2BO60939 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms