Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 CLEC17A-203ENST00000547437 2065 ntTSL 2 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 SEPT4-203ENST00000393086 1556 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 CAPN10-AS1-201ENST00000567819 4000 ntBASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 LILRA4-201ENST00000291759 1944 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 CHI3L2-201ENST00000369744 1489 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 CYP2F2P-201ENST00000437853 1056 ntBASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC108724.1-201ENST00000481669 352 ntBASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC110753.1-201ENST00000505711 1022 ntBASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC098591.1-202ENST00000507914 937 ntBASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC010267.1-201ENST00000508636 553 ntTSL 4 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AL136298.3-201ENST00000556746 445 ntBASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 MIR4309-201ENST00000582498 83 ntBASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 TMED1-204ENST00000588289 541 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC009779.7-201ENST00000609031 469 ntBASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AL109618.3-201ENST00000622748 430 ntBASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 OR10H1-202ENST00000641419 4376 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 DCAKD-202ENST00000342350 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC100774.1-201ENST00000565581 1603 ntBASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 DERL1-202ENST00000405944 1994 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 UBE2V1-207ENST00000420027 1956 ntTSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 ARHGEF10-204ENST00000398564 5480 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.41□□□□□ -0.58
NPIPA3F8WFD2 IGSF3-202ENST00000369483 7326 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NPIPA3F8WFD2 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms