Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
PCDHB1Q9Y5F3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB1Q9Y5F3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB1Q9Y5F3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB1Q9Y5F3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB1Q9Y5F3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PCDHB1Q9Y5F3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB1Q9Y5F3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB1Q9Y5F3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB1Q9Y5F3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB1Q9Y5F3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB1Q9Y5F3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB1Q9Y5F3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHB1Q9Y5F3 AC126544.1-201ENST00000580842 1059 ntBASIC21.74■■□□□ 1.07
PCDHB1Q9Y5F3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB1Q9Y5F3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB1Q9Y5F3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB1Q9Y5F3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 AC242852.2-201ENST00000615738 1807 ntBASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 YBX1P1-201ENST00000445822 960 ntBASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 AL137784.2-201ENST00000607332 1000 ntBASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB1Q9Y5F3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 AC092437.1-201ENST00000624794 1048 ntBASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 TSPY26P-201ENST00000476365 1326 ntBASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 ECEL1P1-201ENST00000373592 1742 ntBASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB1Q9Y5F3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 DUX4L2-201ENST00000561772 1275 ntBASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 DUX4L6-201ENST00000626483 1275 ntBASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 DUX4L1-201ENST00000627662 1275 ntBASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 DUX4L8-201ENST00000629013 1275 ntBASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 DUX4L3-201ENST00000630187 1275 ntBASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 DUX4L7-201ENST00000630678 1275 ntBASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 DUX4L5-201ENST00000630834 1275 ntBASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB1Q9Y5F3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 OR2I1P-207ENST00000453522 948 ntBASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
PCDHB1Q9Y5F3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms