Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 AC139530.1-201ENST00000575312 1977 ntBASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 AC087239.1-201ENST00000622671 572 ntBASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB4Q9Y5E5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 AC008764.7-201ENST00000593779 1081 ntBASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 AL139246.5-201ENST00000606645 996 ntBASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 AC233992.3-201ENST00000607491 485 ntBASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB4Q9Y5E5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB4Q9Y5E5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 LINC00526-201ENST00000581067 1875 ntBASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 AC010141.3-201ENST00000456659 717 ntBASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 AP005435.1-201ENST00000529293 1178 ntBASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB4Q9Y5E5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 AC079089.2-201ENST00000531211 1277 ntBASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHB4Q9Y5E5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
PCDHB4Q9Y5E5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB4Q9Y5E5 EDA-201ENST00000338901 1233 ntBASIC23.26■■□□□ 1.31
PCDHB4Q9Y5E5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHB4Q9Y5E5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB4Q9Y5E5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDHB4Q9Y5E5 AC126544.1-201ENST00000580842 1059 ntBASIC23.26■■□□□ 1.31
PCDHB4Q9Y5E5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHB4Q9Y5E5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB4Q9Y5E5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB4Q9Y5E5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
PCDHB4Q9Y5E5 AC079834.2-201ENST00000609776 1949 ntBASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 AL355001.2-201ENST00000620617 1191 ntBASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
PCDHB4Q9Y5E5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHB4Q9Y5E5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB4Q9Y5E5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB4Q9Y5E5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms