Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.33■□□□□ 0.69
COPS3Q9UNS2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPS3Q9UNS2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPS3Q9UNS2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
COPS3Q9UNS2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPS3Q9UNS2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPS3Q9UNS2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPS3Q9UNS2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPS3Q9UNS2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COPS3Q9UNS2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPS3Q9UNS2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 CA15P2-201ENST00000611168 834 ntBASIC19.33■□□□□ 0.68
COPS3Q9UNS2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
COPS3Q9UNS2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 C17orf82-201ENST00000623772 1530 ntBASIC19.32■□□□□ 0.68
COPS3Q9UNS2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 MTDHP2-201ENST00000601468 714 ntBASIC19.32■□□□□ 0.68
COPS3Q9UNS2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.32■□□□□ 0.68
COPS3Q9UNS2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 KRT125P-201ENST00000546827 989 ntBASIC19.31■□□□□ 0.68
COPS3Q9UNS2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPS3Q9UNS2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 MIR4787-201ENST00000607364 84 ntBASIC19.3■□□□□ 0.68
COPS3Q9UNS2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPS3Q9UNS2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 Z92544.1-202ENST00000571933 1220 ntBASIC19.29■□□□□ 0.68
COPS3Q9UNS2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPS3Q9UNS2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms