Protein–RNA interactions for Protein: Q9UN67

PCDHB10, Protocadherin beta-10, humanhuman

Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB10Q9UN67 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 GUSBP5-202ENST00000510805 1989 ntBASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHB10Q9UN67 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 AC092666.2-201ENST00000613287 246 ntBASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB10Q9UN67 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB10Q9UN67 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB10Q9UN67 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB10Q9UN67 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB10Q9UN67 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
PCDHB10Q9UN67 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
PCDHB10Q9UN67 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB10Q9UN67 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB10Q9UN67 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB10Q9UN67 EDA-201ENST00000338901 1233 ntBASIC18.76■□□□□ 0.59
PCDHB10Q9UN67 SERBP1P1-201ENST00000396021 1160 ntBASIC18.76■□□□□ 0.59
PCDHB10Q9UN67 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB10Q9UN67 AL138724.1-201ENST00000606771 1088 ntBASIC18.76■□□□□ 0.59
PCDHB10Q9UN67 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB10Q9UN67 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB10Q9UN67 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 AL355001.2-201ENST00000620617 1191 ntBASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB10Q9UN67 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB10Q9UN67 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB10Q9UN67 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB10Q9UN67 ECEL1P1-201ENST00000373592 1742 ntBASIC18.74■□□□□ 0.59
PCDHB10Q9UN67 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB10Q9UN67 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB10Q9UN67 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB10Q9UN67 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms