Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 AC021242.3-201ENST00000607598 1377 ntBASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.71■□□□□ 0.91
NIPSNAP3AQ9UFN0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
NIPSNAP3AQ9UFN0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NIPSNAP3AQ9UFN0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.7■□□□□ 0.9
NIPSNAP3AQ9UFN0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.7■□□□□ 0.9
NIPSNAP3AQ9UFN0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.7■□□□□ 0.9
NIPSNAP3AQ9UFN0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.7■□□□□ 0.9
NIPSNAP3AQ9UFN0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.7■□□□□ 0.9
NIPSNAP3AQ9UFN0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.7■□□□□ 0.9
NIPSNAP3AQ9UFN0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NIPSNAP3AQ9UFN0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.7■□□□□ 0.9
NIPSNAP3AQ9UFN0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NIPSNAP3AQ9UFN0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 AC026310.3-201ENST00000625186 2373 ntBASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.69■□□□□ 0.9
NIPSNAP3AQ9UFN0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP3AQ9UFN0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP3AQ9UFN0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP3AQ9UFN0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.65■□□□□ 0.9
NIPSNAP3AQ9UFN0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms