Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCF1Q9UBD9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CLCF1Q9UBD9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLCF1Q9UBD9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCF1Q9UBD9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCF1Q9UBD9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCF1Q9UBD9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCF1Q9UBD9 NTF6G-201ENST00000591094 616 ntBASIC19.37■□□□□ 0.69
CLCF1Q9UBD9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCF1Q9UBD9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 AC022517.1-201ENST00000592429 346 ntBASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCF1Q9UBD9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCF1Q9UBD9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLCF1Q9UBD9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.33■□□□□ 0.69
CLCF1Q9UBD9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.33■□□□□ 0.69
CLCF1Q9UBD9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCF1Q9UBD9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLCF1Q9UBD9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLCF1Q9UBD9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCF1Q9UBD9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLCF1Q9UBD9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.33■□□□□ 0.68
CLCF1Q9UBD9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCF1Q9UBD9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCF1Q9UBD9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCF1Q9UBD9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLCF1Q9UBD9 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.33■□□□□ 0.68
CLCF1Q9UBD9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.33■□□□□ 0.68
CLCF1Q9UBD9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLCF1Q9UBD9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 AC079089.2-201ENST00000531211 1277 ntBASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 IKBKGP1-201ENST00000612193 1073 ntBASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.32■□□□□ 0.68
CLCF1Q9UBD9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 KRT18P61-201ENST00000585825 1298 ntBASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms