Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
PARPBPQ9NWS1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PARPBPQ9NWS1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PARPBPQ9NWS1 AC010141.3-201ENST00000456659 717 ntBASIC19.39■□□□□ 0.69
PARPBPQ9NWS1 IGHV3-19-201ENST00000521488 291 ntBASIC19.39■□□□□ 0.69
PARPBPQ9NWS1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.39■□□□□ 0.69
PARPBPQ9NWS1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PARPBPQ9NWS1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PARPBPQ9NWS1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PARPBPQ9NWS1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PARPBPQ9NWS1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PARPBPQ9NWS1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
PARPBPQ9NWS1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.39■□□□□ 0.69
PARPBPQ9NWS1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 ESRRAP2-201ENST00000418437 1549 ntBASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PARPBPQ9NWS1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PARPBPQ9NWS1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.36■□□□□ 0.69
PARPBPQ9NWS1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.36■□□□□ 0.69
PARPBPQ9NWS1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PARPBPQ9NWS1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PARPBPQ9NWS1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PARPBPQ9NWS1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PARPBPQ9NWS1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.36■□□□□ 0.69
PARPBPQ9NWS1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.36■□□□□ 0.69
PARPBPQ9NWS1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.36■□□□□ 0.69
PARPBPQ9NWS1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
PARPBPQ9NWS1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PARPBPQ9NWS1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
PARPBPQ9NWS1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PARPBPQ9NWS1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PARPBPQ9NWS1 TSPY26P-201ENST00000476365 1326 ntBASIC19.35■□□□□ 0.69
PARPBPQ9NWS1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.35■□□□□ 0.69
PARPBPQ9NWS1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PARPBPQ9NWS1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PARPBPQ9NWS1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PARPBPQ9NWS1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PARPBPQ9NWS1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PARPBPQ9NWS1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PARPBPQ9NWS1 AC019069.1-201ENST00000610008 1333 ntBASIC19.34■□□□□ 0.69
PARPBPQ9NWS1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PARPBPQ9NWS1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
PARPBPQ9NWS1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PARPBPQ9NWS1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PARPBPQ9NWS1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PARPBPQ9NWS1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PARPBPQ9NWS1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PARPBPQ9NWS1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.33■□□□□ 0.69
PARPBPQ9NWS1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PARPBPQ9NWS1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PARPBPQ9NWS1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PARPBPQ9NWS1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PARPBPQ9NWS1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PARPBPQ9NWS1 AC105265.2-201ENST00000467189 838 ntBASIC19.33■□□□□ 0.68
PARPBPQ9NWS1 OXCT2P1-201ENST00000447263 1535 ntBASIC19.33■□□□□ 0.68
PARPBPQ9NWS1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
PARPBPQ9NWS1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PARPBPQ9NWS1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.33■□□□□ 0.68
PARPBPQ9NWS1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms