Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC139530.1-201ENST00000575312 1977 ntBASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 AC079089.2-201ENST00000531211 1277 ntBASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 AC133561.4-201ENST00000566112 224 ntBASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 AL355001.2-201ENST00000620617 1191 ntBASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN4Q9NRR5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 GRAMD4P4-201ENST00000613563 1115 ntBASIC20■□□□□ 0.79
UBQLN4Q9NRR5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN4Q9NRR5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 AC008764.7-201ENST00000593779 1081 ntBASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN4Q9NRR5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 OXCT2P1-201ENST00000447263 1535 ntBASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 AC027682.1-201ENST00000562846 899 ntBASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 AC126544.1-201ENST00000580842 1059 ntBASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 LINC00526-201ENST00000581067 1875 ntBASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN4Q9NRR5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 AC092053.2-201ENST00000640557 1818 ntBASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN4Q9NRR5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 AC079834.2-201ENST00000609776 1949 ntBASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 AC099791.1-201ENST00000416440 715 ntBASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 AP001330.3-201ENST00000520123 633 ntBASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN4Q9NRR5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 475.4 ms