Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 BX664725.1-201ENST00000438252 379 ntBASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A3Q9NQ40 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC52A3Q9NQ40 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SLC52A3Q9NQ40 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC52A3Q9NQ40 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC52A3Q9NQ40 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC52A3Q9NQ40 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SLC52A3Q9NQ40 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC52A3Q9NQ40 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 FEM1AP4-201ENST00000443167 1987 ntBASIC20.65■□□□□ 0.9
SLC52A3Q9NQ40 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.64■□□□□ 0.9
SLC52A3Q9NQ40 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC52A3Q9NQ40 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SLC52A3Q9NQ40 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 AC026471.6-201ENST00000622954 1905 ntBASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC52A3Q9NQ40 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC52A3Q9NQ40 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 AF106564.1-201ENST00000607058 2553 ntBASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 AL031602.1-201ENST00000633169 911 ntBASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SLC52A3Q9NQ40 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC52A3Q9NQ40 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms