Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ZFYVE28Q9HCC9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZFYVE28Q9HCC9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ZFYVE28Q9HCC9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZFYVE28Q9HCC9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZFYVE28Q9HCC9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC25.14■■□□□ 1.62
ZFYVE28Q9HCC9 CNN2P6-201ENST00000439038 900 ntBASIC25.14■■□□□ 1.62
ZFYVE28Q9HCC9 AC098934.4-201ENST00000564127 592 ntBASIC25.14■■□□□ 1.62
ZFYVE28Q9HCC9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZFYVE28Q9HCC9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.61
ZFYVE28Q9HCC9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
ZFYVE28Q9HCC9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.13■■□□□ 1.61
ZFYVE28Q9HCC9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZFYVE28Q9HCC9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
ZFYVE28Q9HCC9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
ZFYVE28Q9HCC9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZFYVE28Q9HCC9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.12■■□□□ 1.61
ZFYVE28Q9HCC9 MIR4758-201ENST00000577688 71 ntBASIC25.12■■□□□ 1.61
ZFYVE28Q9HCC9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.12■■□□□ 1.61
ZFYVE28Q9HCC9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZFYVE28Q9HCC9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.12■■□□□ 1.61
ZFYVE28Q9HCC9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ZFYVE28Q9HCC9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.11■■□□□ 1.61
ZFYVE28Q9HCC9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.11■■□□□ 1.61
ZFYVE28Q9HCC9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC25.11■■□□□ 1.61
ZFYVE28Q9HCC9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.11■■□□□ 1.61
ZFYVE28Q9HCC9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.11■■□□□ 1.61
ZFYVE28Q9HCC9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
ZFYVE28Q9HCC9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.11■■□□□ 1.61
ZFYVE28Q9HCC9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.11■■□□□ 1.61
ZFYVE28Q9HCC9 AC079630.1-202ENST00000618127 1840 ntBASIC25.11■■□□□ 1.61
ZFYVE28Q9HCC9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZFYVE28Q9HCC9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZFYVE28Q9HCC9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZFYVE28Q9HCC9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZFYVE28Q9HCC9 RNA5SP413-201ENST00000516373 109 ntBASIC25.1■■□□□ 1.61
ZFYVE28Q9HCC9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZFYVE28Q9HCC9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZFYVE28Q9HCC9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZFYVE28Q9HCC9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.08■■□□□ 1.61
ZFYVE28Q9HCC9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.08■■□□□ 1.61
ZFYVE28Q9HCC9 AC010536.3-201ENST00000620306 533 ntBASIC25.08■■□□□ 1.61
ZFYVE28Q9HCC9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZFYVE28Q9HCC9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
ZFYVE28Q9HCC9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZFYVE28Q9HCC9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
ZFYVE28Q9HCC9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZFYVE28Q9HCC9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.07■■□□□ 1.6
ZFYVE28Q9HCC9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC25.07■■□□□ 1.6
ZFYVE28Q9HCC9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
ZFYVE28Q9HCC9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZFYVE28Q9HCC9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZFYVE28Q9HCC9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.06■■□□□ 1.6
ZFYVE28Q9HCC9 PRORSD1P-201ENST00000295112 541 ntBASIC25.06■■□□□ 1.6
ZFYVE28Q9HCC9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
ZFYVE28Q9HCC9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.06■■□□□ 1.6
ZFYVE28Q9HCC9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ZFYVE28Q9HCC9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.06■■□□□ 1.6
ZFYVE28Q9HCC9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
ZFYVE28Q9HCC9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
ZFYVE28Q9HCC9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
ZFYVE28Q9HCC9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ZFYVE28Q9HCC9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ZFYVE28Q9HCC9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
ZFYVE28Q9HCC9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ZFYVE28Q9HCC9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.04■■□□□ 1.6
ZFYVE28Q9HCC9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZFYVE28Q9HCC9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC25.04■■□□□ 1.6
ZFYVE28Q9HCC9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZFYVE28Q9HCC9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ZFYVE28Q9HCC9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.04■■□□□ 1.6
ZFYVE28Q9HCC9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms