Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 AC129492.7-201ENST00000622992 756 ntBASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SND1-IT1Q9HBX3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 AC019171.1-201ENST00000601251 1056 ntBASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 AC010542.4-201ENST00000563151 1910 ntBASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 AC005229.4-201ENST00000610085 2198 ntBASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SND1-IT1Q9HBX3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 AL121603.2-201ENST00000557373 2117 ntBASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 AC087742.1-201ENST00000575880 1738 ntBASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SND1-IT1Q9HBX3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 AC139795.1-202ENST00000500444 432 ntBASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SND1-IT1Q9HBX3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 AC004448.1-201ENST00000458332 883 ntBASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 AC120024.1-201ENST00000562672 995 ntBASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 U85056.1-201ENST00000616429 682 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms