Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 SERBP1P1-201ENST00000396021 1160 ntBASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.05■□□□□ 0.96
CLK4Q9HAZ1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 AC006455.2-201ENST00000429931 906 ntBASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 AC096631.2-201ENST00000436136 790 ntBASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 pRNA.6-201ENST00000610482 90 ntBASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 pRNA.5-201ENST00000612139 90 ntBASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 pRNA.11-201ENST00000618423 90 ntBASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 pRNA.13-201ENST00000619112 90 ntBASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK4Q9HAZ1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 AL136162.1-201ENST00000607711 1078 ntBASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 AC136469.2-201ENST00000623944 1028 ntBASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 AL353803.4-201ENST00000565882 1934 ntBASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.03■□□□□ 0.96
CLK4Q9HAZ1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 AC106739.1-201ENST00000617035 715 ntBASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLK4Q9HAZ1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
CLK4Q9HAZ1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.02■□□□□ 0.95
CLK4Q9HAZ1 AC135279.3-201ENST00000610945 1311 ntBASIC21.02■□□□□ 0.95
CLK4Q9HAZ1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
CLK4Q9HAZ1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 AC110285.6-201ENST00000617652 491 ntBASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.01■□□□□ 0.95
CLK4Q9HAZ1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLK4Q9HAZ1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLK4Q9HAZ1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21■□□□□ 0.95
CLK4Q9HAZ1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLK4Q9HAZ1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLK4Q9HAZ1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
CLK4Q9HAZ1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21■□□□□ 0.95
CLK4Q9HAZ1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLK4Q9HAZ1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CLK4Q9HAZ1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLK4Q9HAZ1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLK4Q9HAZ1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21■□□□□ 0.95
CLK4Q9HAZ1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLK4Q9HAZ1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21■□□□□ 0.95
CLK4Q9HAZ1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLK4Q9HAZ1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLK4Q9HAZ1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms