Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.61■■□□□ 1.85
UPF2Q9HAU5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
UPF2Q9HAU5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
UPF2Q9HAU5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
UPF2Q9HAU5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.6■■□□□ 1.85
UPF2Q9HAU5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
UPF2Q9HAU5 AC244015.2-201ENST00000616358 1861 ntBASIC26.6■■□□□ 1.85
UPF2Q9HAU5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
UPF2Q9HAU5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
UPF2Q9HAU5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
UPF2Q9HAU5 AC004987.1-201ENST00000428627 508 ntBASIC26.6■■□□□ 1.85
UPF2Q9HAU5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.6■■□□□ 1.85
UPF2Q9HAU5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
UPF2Q9HAU5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
UPF2Q9HAU5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.59■■□□□ 1.85
UPF2Q9HAU5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.59■■□□□ 1.85
UPF2Q9HAU5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.59■■□□□ 1.85
UPF2Q9HAU5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.59■■□□□ 1.85
UPF2Q9HAU5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
UPF2Q9HAU5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
UPF2Q9HAU5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
UPF2Q9HAU5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
UPF2Q9HAU5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.58■■□□□ 1.85
UPF2Q9HAU5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
UPF2Q9HAU5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
UPF2Q9HAU5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.58■■□□□ 1.85
UPF2Q9HAU5 DUX4L4-201ENST00000566884 1269 ntBASIC26.58■■□□□ 1.85
UPF2Q9HAU5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
UPF2Q9HAU5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
UPF2Q9HAU5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
UPF2Q9HAU5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.57■■□□□ 1.84
UPF2Q9HAU5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 MIR4508-201ENST00000584178 70 ntBASIC26.56■■□□□ 1.84
UPF2Q9HAU5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
UPF2Q9HAU5 AC005229.4-201ENST00000610085 2198 ntBASIC26.56■■□□□ 1.84
UPF2Q9HAU5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
UPF2Q9HAU5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
UPF2Q9HAU5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
UPF2Q9HAU5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
UPF2Q9HAU5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC26.55■■□□□ 1.84
UPF2Q9HAU5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
UPF2Q9HAU5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
UPF2Q9HAU5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
UPF2Q9HAU5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
UPF2Q9HAU5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
UPF2Q9HAU5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
UPF2Q9HAU5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
UPF2Q9HAU5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
UPF2Q9HAU5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
UPF2Q9HAU5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.54■■□□□ 1.84
UPF2Q9HAU5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.54■■□□□ 1.84
UPF2Q9HAU5 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.54■■□□□ 1.84
UPF2Q9HAU5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
UPF2Q9HAU5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
UPF2Q9HAU5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.54■■□□□ 1.84
UPF2Q9HAU5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
UPF2Q9HAU5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
UPF2Q9HAU5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
UPF2Q9HAU5 CA15P2-201ENST00000611168 834 ntBASIC26.52■■□□□ 1.84
UPF2Q9HAU5 MIR6722-201ENST00000617286 78 ntBASIC26.52■■□□□ 1.84
UPF2Q9HAU5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
UPF2Q9HAU5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
UPF2Q9HAU5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
UPF2Q9HAU5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
UPF2Q9HAU5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms