Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ZNF408Q9H9D4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.85■■□□□ 1.73
ZNF408Q9H9D4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
ZNF408Q9H9D4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ZNF408Q9H9D4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
ZNF408Q9H9D4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ZNF408Q9H9D4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
ZNF408Q9H9D4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
ZNF408Q9H9D4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.84■■□□□ 1.73
ZNF408Q9H9D4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF408Q9H9D4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF408Q9H9D4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF408Q9H9D4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF408Q9H9D4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.84■■□□□ 1.73
ZNF408Q9H9D4 AP006294.2-201ENST00000641667 209 ntBASIC25.84■■□□□ 1.73
ZNF408Q9H9D4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.84■■□□□ 1.73
ZNF408Q9H9D4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZNF408Q9H9D4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF408Q9H9D4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF408Q9H9D4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF408Q9H9D4 DUSP5P2-201ENST00000426873 1033 ntBASIC25.83■■□□□ 1.73
ZNF408Q9H9D4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.83■■□□□ 1.73
ZNF408Q9H9D4 AC098590.1-201ENST00000468126 897 ntBASIC25.83■■□□□ 1.73
ZNF408Q9H9D4 SLC7A5P1-201ENST00000568957 537 ntBASIC25.83■■□□□ 1.73
ZNF408Q9H9D4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF408Q9H9D4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZNF408Q9H9D4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF408Q9H9D4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF408Q9H9D4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF408Q9H9D4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF408Q9H9D4 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.82■■□□□ 1.72
ZNF408Q9H9D4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZNF408Q9H9D4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
ZNF408Q9H9D4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 AC145676.1-201ENST00000514988 2004 ntBASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF408Q9H9D4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF408Q9H9D4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.8■■□□□ 1.72
ZNF408Q9H9D4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF408Q9H9D4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF408Q9H9D4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF408Q9H9D4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF408Q9H9D4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ZNF408Q9H9D4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.79■■□□□ 1.72
ZNF408Q9H9D4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF408Q9H9D4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF408Q9H9D4 RARRES2P4-201ENST00000514074 484 ntBASIC25.79■■□□□ 1.72
ZNF408Q9H9D4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
ZNF408Q9H9D4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.79■■□□□ 1.72
ZNF408Q9H9D4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF408Q9H9D4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZNF408Q9H9D4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.78■■□□□ 1.72
ZNF408Q9H9D4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.78■■□□□ 1.72
ZNF408Q9H9D4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.78■■□□□ 1.72
ZNF408Q9H9D4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.78■■□□□ 1.72
ZNF408Q9H9D4 MIPEPP3-201ENST00000412105 444 ntBASIC25.78■■□□□ 1.72
ZNF408Q9H9D4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ZNF408Q9H9D4 AC010536.3-201ENST00000620306 533 ntBASIC25.78■■□□□ 1.72
ZNF408Q9H9D4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZNF408Q9H9D4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.78■■□□□ 1.72
ZNF408Q9H9D4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.77■■□□□ 1.72
ZNF408Q9H9D4 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.77■■□□□ 1.72
ZNF408Q9H9D4 AL158047.1-201ENST00000445918 881 ntBASIC25.77■■□□□ 1.72
ZNF408Q9H9D4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.77■■□□□ 1.72
ZNF408Q9H9D4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.77■■□□□ 1.72
ZNF408Q9H9D4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.77■■□□□ 1.72
ZNF408Q9H9D4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZNF408Q9H9D4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZNF408Q9H9D4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.77■■□□□ 1.72
ZNF408Q9H9D4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
ZNF408Q9H9D4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZNF408Q9H9D4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZNF408Q9H9D4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC25.76■■□□□ 1.71
ZNF408Q9H9D4 AL596275.1-201ENST00000423464 877 ntBASIC25.76■■□□□ 1.71
ZNF408Q9H9D4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.76■■□□□ 1.71
ZNF408Q9H9D4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.76■■□□□ 1.71
ZNF408Q9H9D4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC25.76■■□□□ 1.71
ZNF408Q9H9D4 MKRN4P-201ENST00000444706 1521 ntBASIC25.76■■□□□ 1.71
ZNF408Q9H9D4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZNF408Q9H9D4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZNF408Q9H9D4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.75■■□□□ 1.71
ZNF408Q9H9D4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.75■■□□□ 1.71
ZNF408Q9H9D4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
ZNF408Q9H9D4 AC009237.3-201ENST00000393279 1427 ntBASIC25.75■■□□□ 1.71
ZNF408Q9H9D4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.75■■□□□ 1.71
ZNF408Q9H9D4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ZNF408Q9H9D4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.75■■□□□ 1.71
ZNF408Q9H9D4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.75■■□□□ 1.71
ZNF408Q9H9D4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.75■■□□□ 1.71
ZNF408Q9H9D4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms