Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TMEM38AQ9H6F2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TMEM38AQ9H6F2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TMEM38AQ9H6F2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.27■□□□□ 0.83
TMEM38AQ9H6F2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM38AQ9H6F2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM38AQ9H6F2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM38AQ9H6F2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TMEM38AQ9H6F2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM38AQ9H6F2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM38AQ9H6F2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEM38AQ9H6F2 AC133637.1-201ENST00000624115 1537 ntBASIC20.25■□□□□ 0.83
TMEM38AQ9H6F2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM38AQ9H6F2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TMEM38AQ9H6F2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TMEM38AQ9H6F2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM38AQ9H6F2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 AC079089.2-201ENST00000531211 1277 ntBASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM38AQ9H6F2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.21■□□□□ 0.83
TMEM38AQ9H6F2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TMEM38AQ9H6F2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM38AQ9H6F2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM38AQ9H6F2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TMEM38AQ9H6F2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms