Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 AC103834.1-201ENST00000520383 144 ntBASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 LINC01529-204ENST00000636474 1715 ntBASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHAC1Q9H158 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHAC1Q9H158 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHAC1Q9H158 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHAC1Q9H158 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDHAC1Q9H158 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHAC1Q9H158 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDHAC1Q9H158 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 Z98882.1-201ENST00000622160 2253 ntBASIC20.64■□□□□ 0.89
PCDHAC1Q9H158 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHAC1Q9H158 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHAC1Q9H158 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.63■□□□□ 0.89
PCDHAC1Q9H158 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHAC1Q9H158 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
PCDHAC1Q9H158 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHAC1Q9H158 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHAC1Q9H158 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHAC1Q9H158 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 AC103724.3-201ENST00000564481 992 ntBASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 AL033527.3-201ENST00000566366 1196 ntBASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 SNX5-217ENST00000606557 1087 ntBASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms