Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 LINC01960-201ENST00000563759 1884 ntBASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 UNC93B8-201ENST00000511903 705 ntBASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 DUX4L4-201ENST00000566884 1269 ntBASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AMBRA1Q9C0C7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
AMBRA1Q9C0C7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 AC009086.3-201ENST00000623486 1008 ntBASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AMBRA1Q9C0C7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 AL356441.2-201ENST00000443009 864 ntBASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AMBRA1Q9C0C7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.27■□□□□ 0.84
AMBRA1Q9C0C7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AMBRA1Q9C0C7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
AMBRA1Q9C0C7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.27■□□□□ 0.84
AMBRA1Q9C0C7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.27■□□□□ 0.84
AMBRA1Q9C0C7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AMBRA1Q9C0C7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.27■□□□□ 0.84
AMBRA1Q9C0C7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
AMBRA1Q9C0C7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AMBRA1Q9C0C7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
AMBRA1Q9C0C7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
AMBRA1Q9C0C7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
AMBRA1Q9C0C7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
AMBRA1Q9C0C7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
AMBRA1Q9C0C7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AMBRA1Q9C0C7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms