Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 AC120057.1-201ENST00000483947 663 ntBASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 AC137630.3-201ENST00000607245 391 ntBASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 MIR6722-201ENST00000617286 78 ntBASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 AC005703.6-201ENST00000623265 1329 ntBASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP3-1Q9BYR8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
KRTAP3-1Q9BYR8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
KRTAP3-1Q9BYR8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC11.02□□□□□ -0.64
KRTAP3-1Q9BYR8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
KRTAP3-1Q9BYR8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
KRTAP3-1Q9BYR8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
KRTAP3-1Q9BYR8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
KRTAP3-1Q9BYR8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC11.02□□□□□ -0.64
KRTAP3-1Q9BYR8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC11.02□□□□□ -0.65
KRTAP3-1Q9BYR8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 AC026471.6-201ENST00000622954 1905 ntBASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 TSPY13P-201ENST00000338964 914 ntBASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 AC103724.3-201ENST00000564481 992 ntBASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP3-1Q9BYR8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms