Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA4Q9BXL8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDCA4Q9BXL8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDCA4Q9BXL8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CDCA4Q9BXL8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDCA4Q9BXL8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA4Q9BXL8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDCA4Q9BXL8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
CDCA4Q9BXL8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.49■□□□□ 0.71
CDCA4Q9BXL8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.49■□□□□ 0.71
CDCA4Q9BXL8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA4Q9BXL8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA4Q9BXL8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDCA4Q9BXL8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA4Q9BXL8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA4Q9BXL8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 AC009086.3-201ENST00000623486 1008 ntBASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA4Q9BXL8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA4Q9BXL8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 MIR4281-201ENST00000580852 62 ntBASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 AC074183.2-201ENST00000623112 922 ntBASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA4Q9BXL8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA4Q9BXL8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDCA4Q9BXL8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CDCA4Q9BXL8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDCA4Q9BXL8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDCA4Q9BXL8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.44■□□□□ 0.7
CDCA4Q9BXL8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms