Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 TSPY9P-201ENST00000440215 945 ntBASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 TSPY11P-201ENST00000442607 1045 ntBASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.71■□□□□ 0.91
THUMPD3Q9BV44 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 FAM99A-202ENST00000538190 1989 ntBASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 AC026310.3-201ENST00000625186 2373 ntBASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 DUX4L4-201ENST00000566884 1269 ntBASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 MTDHP2-201ENST00000601468 714 ntBASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
THUMPD3Q9BV44 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 AC010542.4-201ENST00000563151 1910 ntBASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THUMPD3Q9BV44 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
THUMPD3Q9BV44 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 AC010997.5-201ENST00000609182 354 ntBASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms