Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.27■□□□□ 0.68
USB1Q9BQ65 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
USB1Q9BQ65 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
USB1Q9BQ65 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USB1Q9BQ65 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USB1Q9BQ65 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.27■□□□□ 0.68
USB1Q9BQ65 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.27■□□□□ 0.68
USB1Q9BQ65 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USB1Q9BQ65 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.27■□□□□ 0.68
USB1Q9BQ65 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.27■□□□□ 0.68
USB1Q9BQ65 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.27■□□□□ 0.68
USB1Q9BQ65 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USB1Q9BQ65 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USB1Q9BQ65 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.27■□□□□ 0.68
USB1Q9BQ65 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
USB1Q9BQ65 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USB1Q9BQ65 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
USB1Q9BQ65 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USB1Q9BQ65 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USB1Q9BQ65 AL353803.4-201ENST00000565882 1934 ntBASIC19.27■□□□□ 0.67
USB1Q9BQ65 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.27■□□□□ 0.67
USB1Q9BQ65 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.27■□□□□ 0.67
USB1Q9BQ65 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USB1Q9BQ65 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
USB1Q9BQ65 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USB1Q9BQ65 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USB1Q9BQ65 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.26■□□□□ 0.67
USB1Q9BQ65 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.26■□□□□ 0.67
USB1Q9BQ65 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USB1Q9BQ65 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
USB1Q9BQ65 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
USB1Q9BQ65 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USB1Q9BQ65 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USB1Q9BQ65 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.25■□□□□ 0.67
USB1Q9BQ65 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USB1Q9BQ65 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
USB1Q9BQ65 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.25■□□□□ 0.67
USB1Q9BQ65 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.25■□□□□ 0.67
USB1Q9BQ65 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USB1Q9BQ65 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.25■□□□□ 0.67
USB1Q9BQ65 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.25■□□□□ 0.67
USB1Q9BQ65 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USB1Q9BQ65 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USB1Q9BQ65 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USB1Q9BQ65 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USB1Q9BQ65 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USB1Q9BQ65 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USB1Q9BQ65 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USB1Q9BQ65 AC027612.3-201ENST00000413684 1047 ntBASIC19.24■□□□□ 0.67
USB1Q9BQ65 AC123595.1-201ENST00000440769 1046 ntBASIC19.24■□□□□ 0.67
USB1Q9BQ65 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USB1Q9BQ65 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USB1Q9BQ65 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USB1Q9BQ65 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USB1Q9BQ65 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.23■□□□□ 0.67
USB1Q9BQ65 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USB1Q9BQ65 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
USB1Q9BQ65 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USB1Q9BQ65 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USB1Q9BQ65 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USB1Q9BQ65 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.23■□□□□ 0.67
USB1Q9BQ65 YBX1P1-201ENST00000445822 960 ntBASIC19.23■□□□□ 0.67
USB1Q9BQ65 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.23■□□□□ 0.67
USB1Q9BQ65 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USB1Q9BQ65 AC010525.1-201ENST00000585559 441 ntBASIC19.23■□□□□ 0.67
USB1Q9BQ65 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USB1Q9BQ65 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USB1Q9BQ65 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.23■□□□□ 0.67
USB1Q9BQ65 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.23■□□□□ 0.67
USB1Q9BQ65 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USB1Q9BQ65 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.23■□□□□ 0.67
USB1Q9BQ65 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.22■□□□□ 0.67
USB1Q9BQ65 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USB1Q9BQ65 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USB1Q9BQ65 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USB1Q9BQ65 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
USB1Q9BQ65 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USB1Q9BQ65 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USB1Q9BQ65 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USB1Q9BQ65 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USB1Q9BQ65 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USB1Q9BQ65 AC012414.1-201ENST00000556676 535 ntBASIC19.22■□□□□ 0.67
USB1Q9BQ65 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.22■□□□□ 0.67
USB1Q9BQ65 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.22■□□□□ 0.67
USB1Q9BQ65 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
USB1Q9BQ65 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USB1Q9BQ65 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
USB1Q9BQ65 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USB1Q9BQ65 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USB1Q9BQ65 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USB1Q9BQ65 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USB1Q9BQ65 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USB1Q9BQ65 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USB1Q9BQ65 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.21■□□□□ 0.67
USB1Q9BQ65 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USB1Q9BQ65 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.21■□□□□ 0.67
USB1Q9BQ65 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.21■□□□□ 0.67
USB1Q9BQ65 AC092068.2-201ENST00000590491 1708 ntBASIC19.21■□□□□ 0.67
USB1Q9BQ65 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USB1Q9BQ65 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms