Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 AL354811.1-201ENST00000610286 706 ntBASIC21.72■■□□□ 1.07
LYSMD1Q96S90 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 AC105233.4-201ENST00000642045 216 ntBASIC21.72■■□□□ 1.07
LYSMD1Q96S90 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 AC139530.1-201ENST00000575312 1977 ntBASIC21.71■■□□□ 1.07
LYSMD1Q96S90 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD1Q96S90 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.7■■□□□ 1.07
LYSMD1Q96S90 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LYSMD1Q96S90 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.7■■□□□ 1.06
LYSMD1Q96S90 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LYSMD1Q96S90 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.7■■□□□ 1.06
LYSMD1Q96S90 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD1Q96S90 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.7■■□□□ 1.06
LYSMD1Q96S90 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD1Q96S90 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.7■■□□□ 1.06
LYSMD1Q96S90 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD1Q96S90 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.7■■□□□ 1.06
LYSMD1Q96S90 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
LYSMD1Q96S90 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD1Q96S90 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 AC233723.2-201ENST00000623798 2106 ntBASIC21.68■■□□□ 1.06
LYSMD1Q96S90 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 AC080038.3-201ENST00000623346 1952 ntBASIC21.68■■□□□ 1.06
LYSMD1Q96S90 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD1Q96S90 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 OR7E47P-201ENST00000546390 1422 ntBASIC21.67■■□□□ 1.06
LYSMD1Q96S90 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD1Q96S90 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 AC027612.3-201ENST00000413684 1047 ntBASIC21.66■■□□□ 1.06
LYSMD1Q96S90 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.66■■□□□ 1.06
LYSMD1Q96S90 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms