Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 AC087239.1-201ENST00000622671 572 ntBASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TUBGCP6Q96RT7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
TUBGCP6Q96RT7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TUBGCP6Q96RT7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC28.21■■■□□ 2.11
TUBGCP6Q96RT7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TUBGCP6Q96RT7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.21■■■□□ 2.11
TUBGCP6Q96RT7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
TUBGCP6Q96RT7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TUBGCP6Q96RT7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TUBGCP6Q96RT7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TUBGCP6Q96RT7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
TUBGCP6Q96RT7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.2■■■□□ 2.11
TUBGCP6Q96RT7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.2■■■□□ 2.11
TUBGCP6Q96RT7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.2■■■□□ 2.11
TUBGCP6Q96RT7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TUBGCP6Q96RT7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TUBGCP6Q96RT7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TUBGCP6Q96RT7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TUBGCP6Q96RT7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.2■■■□□ 2.1
TUBGCP6Q96RT7 TESC-206ENST00000541210 936 ntTSL 3 BASIC28.2■■■□□ 2.1
TUBGCP6Q96RT7 AC231657.2-201ENST00000624556 255 ntBASIC28.2■■■□□ 2.1
TUBGCP6Q96RT7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
TUBGCP6Q96RT7 AC144652.1-201ENST00000609974 1624 ntBASIC28.19■■■□□ 2.1
TUBGCP6Q96RT7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TUBGCP6Q96RT7 SLC29A4P1-201ENST00000398760 971 ntBASIC28.19■■■□□ 2.1
TUBGCP6Q96RT7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.19■■■□□ 2.1
TUBGCP6Q96RT7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TUBGCP6Q96RT7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC28.19■■■□□ 2.1
TUBGCP6Q96RT7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC28.18■■■□□ 2.1
TUBGCP6Q96RT7 CNN2P6-201ENST00000439038 900 ntBASIC28.18■■■□□ 2.1
TUBGCP6Q96RT7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.18■■■□□ 2.1
TUBGCP6Q96RT7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TUBGCP6Q96RT7 SMUG1P1-201ENST00000590640 811 ntBASIC28.18■■■□□ 2.1
TUBGCP6Q96RT7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC28.18■■■□□ 2.1
TUBGCP6Q96RT7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TUBGCP6Q96RT7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TUBGCP6Q96RT7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TUBGCP6Q96RT7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TUBGCP6Q96RT7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TUBGCP6Q96RT7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TUBGCP6Q96RT7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TUBGCP6Q96RT7 AC098590.1-201ENST00000468126 897 ntBASIC28.17■■■□□ 2.1
TUBGCP6Q96RT7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TUBGCP6Q96RT7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC28.17■■■□□ 2.1
TUBGCP6Q96RT7 AC104187.1-201ENST00000607510 612 ntBASIC28.17■■■□□ 2.1
TUBGCP6Q96RT7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TUBGCP6Q96RT7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC28.17■■■□□ 2.1
TUBGCP6Q96RT7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TUBGCP6Q96RT7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TUBGCP6Q96RT7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
TUBGCP6Q96RT7 RPS2P52-201ENST00000469610 820 ntBASIC28.16■■■□□ 2.1
TUBGCP6Q96RT7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC28.16■■■□□ 2.1
TUBGCP6Q96RT7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC28.16■■■□□ 2.1
TUBGCP6Q96RT7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
TUBGCP6Q96RT7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TUBGCP6Q96RT7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TUBGCP6Q96RT7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TUBGCP6Q96RT7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TUBGCP6Q96RT7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
TUBGCP6Q96RT7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.15■■■□□ 2.1
TUBGCP6Q96RT7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC28.15■■■□□ 2.1
TUBGCP6Q96RT7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TUBGCP6Q96RT7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TUBGCP6Q96RT7 AC083906.2-201ENST00000511578 360 ntBASIC28.15■■■□□ 2.1
TUBGCP6Q96RT7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.15■■■□□ 2.1
TUBGCP6Q96RT7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TUBGCP6Q96RT7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TUBGCP6Q96RT7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TUBGCP6Q96RT7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC28.14■■■□□ 2.1
TUBGCP6Q96RT7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
TUBGCP6Q96RT7 UQCRFS1P1-201ENST00000435169 820 ntBASIC28.14■■■□□ 2.1
TUBGCP6Q96RT7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC28.14■■■□□ 2.1
TUBGCP6Q96RT7 ITM2C-210ENST00000620962 501 ntBASIC28.14■■■□□ 2.1
TUBGCP6Q96RT7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TUBGCP6Q96RT7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.14■■■□□ 2.09
TUBGCP6Q96RT7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TUBGCP6Q96RT7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 MDK-213ENST00000617138 635 ntTSL 2 BASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 AC005181.1-201ENST00000604782 1256 ntBASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TUBGCP6Q96RT7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms