Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 AC139530.1-201ENST00000575312 1977 ntBASIC18.13■□□□□ 0.49
GAFA1Q96PS6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GAFA1Q96PS6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAFA1Q96PS6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 AC242852.2-201ENST00000615738 1807 ntBASIC18.11■□□□□ 0.49
GAFA1Q96PS6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAFA1Q96PS6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 AL117328.2-201ENST00000624617 1940 ntBASIC18.1■□□□□ 0.49
GAFA1Q96PS6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAFA1Q96PS6 LINC00526-201ENST00000581067 1875 ntBASIC18.09■□□□□ 0.49
GAFA1Q96PS6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 AC105265.2-201ENST00000467189 838 ntBASIC18.09■□□□□ 0.49
GAFA1Q96PS6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.09■□□□□ 0.49
GAFA1Q96PS6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GAFA1Q96PS6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.08■□□□□ 0.49
GAFA1Q96PS6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GAFA1Q96PS6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GAFA1Q96PS6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.08■□□□□ 0.49
GAFA1Q96PS6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GAFA1Q96PS6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
GAFA1Q96PS6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GAFA1Q96PS6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.08■□□□□ 0.48
GAFA1Q96PS6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GAFA1Q96PS6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.08■□□□□ 0.48
GAFA1Q96PS6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.08■□□□□ 0.48
GAFA1Q96PS6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GAFA1Q96PS6 ECEL1P1-201ENST00000373592 1742 ntBASIC18.08■□□□□ 0.48
GAFA1Q96PS6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GAFA1Q96PS6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GAFA1Q96PS6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms