Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 AC079089.2-201ENST00000531211 1277 ntBASIC20.91■□□□□ 0.94
UBE2E3Q969T4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 AC010141.3-201ENST00000456659 717 ntBASIC20.9■□□□□ 0.94
UBE2E3Q969T4 AP005435.1-201ENST00000529293 1178 ntBASIC20.9■□□□□ 0.94
UBE2E3Q969T4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 AC010525.1-201ENST00000585559 441 ntBASIC20.9■□□□□ 0.94
UBE2E3Q969T4 AL136162.1-201ENST00000607711 1078 ntBASIC20.9■□□□□ 0.94
UBE2E3Q969T4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
UBE2E3Q969T4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UBE2E3Q969T4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
UBE2E3Q969T4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.89■□□□□ 0.94
UBE2E3Q969T4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
UBE2E3Q969T4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.89■□□□□ 0.93
UBE2E3Q969T4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBE2E3Q969T4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
UBE2E3Q969T4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
UBE2E3Q969T4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBE2E3Q969T4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 AC135279.3-201ENST00000610945 1311 ntBASIC20.88■□□□□ 0.93
UBE2E3Q969T4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 EP400NL-214ENST00000641289 2402 ntBASIC20.88■□□□□ 0.93
UBE2E3Q969T4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBE2E3Q969T4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 SLC47A1P1-202ENST00000449666 945 ntBASIC20.87■□□□□ 0.93
UBE2E3Q969T4 MIR4767-201ENST00000582827 78 ntBASIC20.87■□□□□ 0.93
UBE2E3Q969T4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBE2E3Q969T4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 BX842568.3-201ENST00000418104 571 ntBASIC20.86■□□□□ 0.93
UBE2E3Q969T4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 AC024257.2-201ENST00000549699 147 ntBASIC20.86■□□□□ 0.93
UBE2E3Q969T4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
UBE2E3Q969T4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBE2E3Q969T4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms