Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2FQ969M7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2FQ969M7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2FQ969M7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE2FQ969M7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2FQ969M7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE2FQ969M7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE2FQ969M7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2FQ969M7 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.81■□□□□ 0.76
UBE2FQ969M7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2FQ969M7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2FQ969M7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2FQ969M7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2FQ969M7 FEM1AP4-201ENST00000443167 1987 ntBASIC19.81■□□□□ 0.76
UBE2FQ969M7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE2FQ969M7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE2FQ969M7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE2FQ969M7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2FQ969M7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2FQ969M7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2FQ969M7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE2FQ969M7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
UBE2FQ969M7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE2FQ969M7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
UBE2FQ969M7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2FQ969M7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2FQ969M7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE2FQ969M7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2FQ969M7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE2FQ969M7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2FQ969M7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2FQ969M7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2FQ969M7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
UBE2FQ969M7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2FQ969M7 TSPY13P-201ENST00000338964 914 ntBASIC19.79■□□□□ 0.76
UBE2FQ969M7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE2FQ969M7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2FQ969M7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
UBE2FQ969M7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2FQ969M7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2FQ969M7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2FQ969M7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2FQ969M7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2FQ969M7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2FQ969M7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2FQ969M7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2FQ969M7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2FQ969M7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE2FQ969M7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UBE2FQ969M7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.78■□□□□ 0.76
UBE2FQ969M7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2FQ969M7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.78■□□□□ 0.76
UBE2FQ969M7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UBE2FQ969M7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.78■□□□□ 0.76
UBE2FQ969M7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2FQ969M7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2FQ969M7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UBE2FQ969M7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2FQ969M7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2FQ969M7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2FQ969M7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE2FQ969M7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE2FQ969M7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE2FQ969M7 SNX5-217ENST00000606557 1087 ntBASIC19.77■□□□□ 0.76
UBE2FQ969M7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2FQ969M7 FP325331.1-202ENST00000623531 1380 ntBASIC19.77■□□□□ 0.76
UBE2FQ969M7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2FQ969M7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.77■□□□□ 0.76
UBE2FQ969M7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2FQ969M7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2FQ969M7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2FQ969M7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2FQ969M7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBE2FQ969M7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
UBE2FQ969M7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2FQ969M7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2FQ969M7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2FQ969M7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2FQ969M7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2FQ969M7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2FQ969M7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE2FQ969M7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.76■□□□□ 0.75
UBE2FQ969M7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.76■□□□□ 0.75
UBE2FQ969M7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2FQ969M7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2FQ969M7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
UBE2FQ969M7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2FQ969M7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2FQ969M7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UBE2FQ969M7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.75■□□□□ 0.75
UBE2FQ969M7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
UBE2FQ969M7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2FQ969M7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2FQ969M7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE2FQ969M7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2FQ969M7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
UBE2FQ969M7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2FQ969M7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2FQ969M7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE2FQ969M7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms