Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNED1Q8TER0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNED1Q8TER0 AC005181.1-201ENST00000604782 1256 ntBASIC26.82■■□□□ 1.88
SNED1Q8TER0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNED1Q8TER0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNED1Q8TER0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNED1Q8TER0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.81■■□□□ 1.88
SNED1Q8TER0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.81■■□□□ 1.88
SNED1Q8TER0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SNED1Q8TER0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNED1Q8TER0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
SNED1Q8TER0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.8■■□□□ 1.88
SNED1Q8TER0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNED1Q8TER0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SNED1Q8TER0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.8■■□□□ 1.88
SNED1Q8TER0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
SNED1Q8TER0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.8■■□□□ 1.88
SNED1Q8TER0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26.8■■□□□ 1.88
SNED1Q8TER0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.8■■□□□ 1.88
SNED1Q8TER0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SNED1Q8TER0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SNED1Q8TER0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26.79■■□□□ 1.88
SNED1Q8TER0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.79■■□□□ 1.88
SNED1Q8TER0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNED1Q8TER0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNED1Q8TER0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.78■■□□□ 1.88
SNED1Q8TER0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNED1Q8TER0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.78■■□□□ 1.88
SNED1Q8TER0 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.78■■□□□ 1.88
SNED1Q8TER0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNED1Q8TER0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNED1Q8TER0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.78■■□□□ 1.88
SNED1Q8TER0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.78■■□□□ 1.88
SNED1Q8TER0 MYCNOS-205ENST00000641950 531 ntBASIC26.78■■□□□ 1.88
SNED1Q8TER0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNED1Q8TER0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SNED1Q8TER0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.77■■□□□ 1.88
SNED1Q8TER0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SNED1Q8TER0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.77■■□□□ 1.88
SNED1Q8TER0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.77■■□□□ 1.88
SNED1Q8TER0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.77■■□□□ 1.88
SNED1Q8TER0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNED1Q8TER0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.77■■□□□ 1.88
SNED1Q8TER0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.88
SNED1Q8TER0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.76■■□□□ 1.88
SNED1Q8TER0 AL139125.2-201ENST00000623134 1869 ntBASIC26.76■■□□□ 1.88
SNED1Q8TER0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNED1Q8TER0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
SNED1Q8TER0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.76■■□□□ 1.87
SNED1Q8TER0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
SNED1Q8TER0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNED1Q8TER0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.76■■□□□ 1.87
SNED1Q8TER0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.76■■□□□ 1.87
SNED1Q8TER0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNED1Q8TER0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNED1Q8TER0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNED1Q8TER0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.76■■□□□ 1.87
SNED1Q8TER0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.75■■□□□ 1.87
SNED1Q8TER0 AC073210.2-201ENST00000430369 194 ntBASIC26.75■■□□□ 1.87
SNED1Q8TER0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNED1Q8TER0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
SNED1Q8TER0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNED1Q8TER0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNED1Q8TER0 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.74■■□□□ 1.87
SNED1Q8TER0 AL353803.4-201ENST00000565882 1934 ntBASIC26.74■■□□□ 1.87
SNED1Q8TER0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNED1Q8TER0 AC007322.1-201ENST00000426983 750 ntBASIC26.74■■□□□ 1.87
SNED1Q8TER0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.74■■□□□ 1.87
SNED1Q8TER0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.74■■□□□ 1.87
SNED1Q8TER0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC26.74■■□□□ 1.87
SNED1Q8TER0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.74■■□□□ 1.87
SNED1Q8TER0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNED1Q8TER0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SNED1Q8TER0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNED1Q8TER0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNED1Q8TER0 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.73■■□□□ 1.87
SNED1Q8TER0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
SNED1Q8TER0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
SNED1Q8TER0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.73■■□□□ 1.87
SNED1Q8TER0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.73■■□□□ 1.87
SNED1Q8TER0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
SNED1Q8TER0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNED1Q8TER0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.73■■□□□ 1.87
SNED1Q8TER0 DUSP8P3-201ENST00000399571 1760 ntBASIC26.72■■□□□ 1.87
SNED1Q8TER0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.72■■□□□ 1.87
SNED1Q8TER0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNED1Q8TER0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNED1Q8TER0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNED1Q8TER0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNED1Q8TER0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNED1Q8TER0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SNED1Q8TER0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNED1Q8TER0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNED1Q8TER0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNED1Q8TER0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNED1Q8TER0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SNED1Q8TER0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNED1Q8TER0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SNED1Q8TER0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
SNED1Q8TER0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms