Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB3IL1Q8TBN0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 AC009086.3-201ENST00000623486 1008 ntBASIC21.61■■□□□ 1.05
RAB3IL1Q8TBN0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 AL033527.3-201ENST00000566366 1196 ntBASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB3IL1Q8TBN0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
RAB3IL1Q8TBN0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAB3IL1Q8TBN0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.58■■□□□ 1.05
RAB3IL1Q8TBN0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAB3IL1Q8TBN0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAB3IL1Q8TBN0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAB3IL1Q8TBN0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAB3IL1Q8TBN0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAB3IL1Q8TBN0 SNX5-217ENST00000606557 1087 ntBASIC21.58■■□□□ 1.05
RAB3IL1Q8TBN0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RAB3IL1Q8TBN0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAB3IL1Q8TBN0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RAB3IL1Q8TBN0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.58■■□□□ 1.04
RAB3IL1Q8TBN0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAB3IL1Q8TBN0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAB3IL1Q8TBN0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAB3IL1Q8TBN0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 CA15P2-201ENST00000611168 834 ntBASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RAB3IL1Q8TBN0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 AC074183.2-201ENST00000623112 922 ntBASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.56■■□□□ 1.04
RAB3IL1Q8TBN0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.55■■□□□ 1.04
RAB3IL1Q8TBN0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB3IL1Q8TBN0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.54■■□□□ 1.04
RAB3IL1Q8TBN0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB3IL1Q8TBN0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB3IL1Q8TBN0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RAB3IL1Q8TBN0 DUX4L4-201ENST00000566884 1269 ntBASIC21.54■■□□□ 1.04
RAB3IL1Q8TBN0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RAB3IL1Q8TBN0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms