Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.42■■□□□ 1.02
HMGCLL1Q8TB92 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.42■■□□□ 1.02
HMGCLL1Q8TB92 AC087742.1-201ENST00000575880 1738 ntBASIC21.42■■□□□ 1.02
HMGCLL1Q8TB92 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HMGCLL1Q8TB92 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 C11orf96-202ENST00000528572 1834 ntBASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 AC092053.2-201ENST00000640557 1818 ntBASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLL1Q8TB92 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 PBX2P1-201ENST00000493219 1291 ntBASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLL1Q8TB92 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGCLL1Q8TB92 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.39■■□□□ 1.02
HMGCLL1Q8TB92 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.39■■□□□ 1.02
HMGCLL1Q8TB92 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.39■■□□□ 1.01
HMGCLL1Q8TB92 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.39■■□□□ 1.01
HMGCLL1Q8TB92 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
HMGCLL1Q8TB92 OR2I1P-207ENST00000453522 948 ntBASIC21.39■■□□□ 1.01
HMGCLL1Q8TB92 MIR4767-201ENST00000582827 78 ntBASIC21.39■■□□□ 1.01
HMGCLL1Q8TB92 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
HMGCLL1Q8TB92 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.39■■□□□ 1.01
HMGCLL1Q8TB92 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCLL1Q8TB92 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCLL1Q8TB92 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 EDA-201ENST00000338901 1233 ntBASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.38■■□□□ 1.01
HMGCLL1Q8TB92 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLL1Q8TB92 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCLL1Q8TB92 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HMGCLL1Q8TB92 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.36■■□□□ 1.01
HMGCLL1Q8TB92 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.36■■□□□ 1.01
HMGCLL1Q8TB92 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
HMGCLL1Q8TB92 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
HMGCLL1Q8TB92 AC004687.1-201ENST00000579003 1625 ntBASIC21.36■■□□□ 1.01
HMGCLL1Q8TB92 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCLL1Q8TB92 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCLL1Q8TB92 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.35■■□□□ 1.01
HMGCLL1Q8TB92 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCLL1Q8TB92 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCLL1Q8TB92 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.35■■□□□ 1.01
HMGCLL1Q8TB92 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.35■■□□□ 1.01
HMGCLL1Q8TB92 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.35■■□□□ 1.01
HMGCLL1Q8TB92 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
HMGCLL1Q8TB92 FBXW4P1-201ENST00000426721 2239 ntBASIC21.35■■□□□ 1.01
HMGCLL1Q8TB92 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCLL1Q8TB92 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms