Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SVIPQ8NHG7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SVIPQ8NHG7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SVIPQ8NHG7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
SVIPQ8NHG7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SVIPQ8NHG7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SVIPQ8NHG7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SVIPQ8NHG7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 CROCCP3-202ENST00000420820 1947 ntBASIC13.77□□□□□ -0.21
SVIPQ8NHG7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SVIPQ8NHG7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 AL023775.1-201ENST00000454907 1746 ntBASIC13.76□□□□□ -0.21
SVIPQ8NHG7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 AC084018.2-201ENST00000613093 2607 ntBASIC13.76□□□□□ -0.21
SVIPQ8NHG7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SVIPQ8NHG7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SVIPQ8NHG7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms