Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
DNAAF1Q8NEP3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF1Q8NEP3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF1Q8NEP3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF1Q8NEP3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.07■□□□□ 0.64
DNAAF1Q8NEP3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 KRT125P-201ENST00000546827 989 ntBASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 AC092028.1-203ENST00000608262 953 ntBASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
DNAAF1Q8NEP3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 LINC01529-204ENST00000636474 1715 ntBASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF1Q8NEP3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.04■□□□□ 0.64
DNAAF1Q8NEP3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 LINC01960-201ENST00000563759 1884 ntBASIC19.03■□□□□ 0.64
DNAAF1Q8NEP3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
DNAAF1Q8NEP3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DNAAF1Q8NEP3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DNAAF1Q8NEP3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DNAAF1Q8NEP3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DNAAF1Q8NEP3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.02■□□□□ 0.64
DNAAF1Q8NEP3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
DNAAF1Q8NEP3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
DNAAF1Q8NEP3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DNAAF1Q8NEP3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DNAAF1Q8NEP3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.02■□□□□ 0.63
DNAAF1Q8NEP3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNAAF1Q8NEP3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 AC005229.4-201ENST00000610085 2198 ntBASIC19■□□□□ 0.63
DNAAF1Q8NEP3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms